Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxc2Q61850 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxc2Q61850 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxc2Q61850 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxc2Q61850 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxc2Q61850 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.19■□□□□ 0.66
Foxc2Q61850 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.19■□□□□ 0.66
Foxc2Q61850 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Foxc2Q61850 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.18■□□□□ 0.66
Foxc2Q61850 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.18■□□□□ 0.66
Foxc2Q61850 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Foxc2Q61850 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Foxc2Q61850 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxc2Q61850 Gm9397-201ENSMUST00000200125 605 ntBASIC19.17■□□□□ 0.66
Foxc2Q61850 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxc2Q61850 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxc2Q61850 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Foxc2Q61850 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Foxc2Q61850 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Foxc2Q61850 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxc2Q61850 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxc2Q61850 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxc2Q61850 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Foxc2Q61850 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Foxc2Q61850 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.13■□□□□ 0.65
Foxc2Q61850 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Foxc2Q61850 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxc2Q61850 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.11■□□□□ 0.65
Foxc2Q61850 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Foxc2Q61850 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.11■□□□□ 0.65
Foxc2Q61850 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Foxc2Q61850 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Foxc2Q61850 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxc2Q61850 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Foxc2Q61850 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Foxc2Q61850 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Foxc2Q61850 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Foxc2Q61850 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.08■□□□□ 0.64
Foxc2Q61850 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Foxc2Q61850 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Foxc2Q61850 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxc2Q61850 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Foxc2Q61850 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxc2Q61850 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Foxc2Q61850 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Foxc2Q61850 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxc2Q61850 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxc2Q61850 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxc2Q61850 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.05■□□□□ 0.64
Foxc2Q61850 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.05■□□□□ 0.64
Foxc2Q61850 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxc2Q61850 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxc2Q61850 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Foxc2Q61850 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Foxc2Q61850 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxc2Q61850 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxc2Q61850 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.03■□□□□ 0.64
Foxc2Q61850 Gm24970-201ENSMUST00000175582 82 ntBASIC19.03■□□□□ 0.64
Foxc2Q61850 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Foxc2Q61850 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.02■□□□□ 0.64
Foxc2Q61850 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Foxc2Q61850 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Foxc2Q61850 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Foxc2Q61850 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Foxc2Q61850 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Foxc2Q61850 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.01■□□□□ 0.63
Foxc2Q61850 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Foxc2Q61850 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19■□□□□ 0.63
Foxc2Q61850 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Foxc2Q61850 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Foxc2Q61850 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Foxc2Q61850 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.99■□□□□ 0.63
Foxc2Q61850 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Foxc2Q61850 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Foxc2Q61850 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Foxc2Q61850 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxc2Q61850 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxc2Q61850 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Foxc2Q61850 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Foxc2Q61850 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.96■□□□□ 0.63
Foxc2Q61850 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Foxc2Q61850 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.96■□□□□ 0.63
Foxc2Q61850 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Foxc2Q61850 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.95■□□□□ 0.62
Foxc2Q61850 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxc2Q61850 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxc2Q61850 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxc2Q61850 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Foxc2Q61850 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Foxc2Q61850 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Foxc2Q61850 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.94■□□□□ 0.62
Foxc2Q61850 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Foxc2Q61850 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Foxc2Q61850 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxc2Q61850 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxc2Q61850 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Foxc2Q61850 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxc2Q61850 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxc2Q61850 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Foxc2Q61850 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms