Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav7d-4Q5R1H9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav7d-4Q5R1H9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav7d-4Q5R1H9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7d-4Q5R1H9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav7d-4Q5R1H9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7d-4Q5R1H9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7d-4Q5R1H9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav7d-4Q5R1H9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trav7d-4Q5R1H9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Trav7d-4Q5R1H9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav7d-4Q5R1H9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav7d-4Q5R1H9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.74■□□□□ 0.59
Trav7d-4Q5R1H9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav7d-4Q5R1H9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7d-4Q5R1H9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav7d-4Q5R1H9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trav7d-4Q5R1H9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav7d-4Q5R1H9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav7d-4Q5R1H9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7d-4Q5R1H9 Rab21-202ENSMUST00000218831 843 ntBASIC18.7■□□□□ 0.58
Trav7d-4Q5R1H9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7d-4Q5R1H9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav7d-4Q5R1H9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7d-4Q5R1H9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7d-4Q5R1H9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trav7d-4Q5R1H9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7d-4Q5R1H9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7d-4Q5R1H9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Trav7d-4Q5R1H9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7d-4Q5R1H9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trav7d-4Q5R1H9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7d-4Q5R1H9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7d-4Q5R1H9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7d-4Q5R1H9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trav7d-4Q5R1H9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Trav7d-4Q5R1H9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7d-4Q5R1H9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7d-4Q5R1H9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7d-4Q5R1H9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trav7d-4Q5R1H9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trav7d-4Q5R1H9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7d-4Q5R1H9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.62■□□□□ 0.57
Trav7d-4Q5R1H9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7d-4Q5R1H9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.62■□□□□ 0.57
Trav7d-4Q5R1H9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7d-4Q5R1H9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav7d-4Q5R1H9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7d-4Q5R1H9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7d-4Q5R1H9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7d-4Q5R1H9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7d-4Q5R1H9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Trav7d-4Q5R1H9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trav7d-4Q5R1H9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7d-4Q5R1H9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav7d-4Q5R1H9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7d-4Q5R1H9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7d-4Q5R1H9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7d-4Q5R1H9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7d-4Q5R1H9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav7d-4Q5R1H9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7d-4Q5R1H9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trav7d-4Q5R1H9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav7d-4Q5R1H9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7d-4Q5R1H9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7d-4Q5R1H9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7d-4Q5R1H9 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.55■□□□□ 0.56
Trav7d-4Q5R1H9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trav7d-4Q5R1H9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7d-4Q5R1H9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7d-4Q5R1H9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7d-4Q5R1H9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav7d-4Q5R1H9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7d-4Q5R1H9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7d-4Q5R1H9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7d-4Q5R1H9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7d-4Q5R1H9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav7d-4Q5R1H9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trav7d-4Q5R1H9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav7d-4Q5R1H9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Trav7d-4Q5R1H9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav7d-4Q5R1H9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7d-4Q5R1H9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.51■□□□□ 0.55
Trav7d-4Q5R1H9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Trav7d-4Q5R1H9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7d-4Q5R1H9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav7d-4Q5R1H9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.5■□□□□ 0.55
Trav7d-4Q5R1H9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Trav7d-4Q5R1H9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trav7d-4Q5R1H9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav7d-4Q5R1H9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trav7d-4Q5R1H9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7d-4Q5R1H9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7d-4Q5R1H9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7d-4Q5R1H9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7d-4Q5R1H9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7d-4Q5R1H9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7d-4Q5R1H9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7d-4Q5R1H9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7d-4Q5R1H9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms