Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Gm12253Q5NC48 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Gm12253Q5NC48 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Gm12253Q5NC48 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.51■■□□□ 1.03
Gm12253Q5NC48 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.5■■□□□ 1.03
Gm12253Q5NC48 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm12253Q5NC48 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm12253Q5NC48 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Gm12253Q5NC48 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
Gm12253Q5NC48 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm12253Q5NC48 Zxda-201ENSMUST00000117281 2621 ntBASIC21.48■■□□□ 1.03
Gm12253Q5NC48 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.48■■□□□ 1.03
Gm12253Q5NC48 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm12253Q5NC48 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm12253Q5NC48 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm12253Q5NC48 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Gm12253Q5NC48 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Gm12253Q5NC48 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm12253Q5NC48 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm12253Q5NC48 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Gm12253Q5NC48 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm12253Q5NC48 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Gm12253Q5NC48 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.4■■□□□ 1.02
Gm12253Q5NC48 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.4■■□□□ 1.02
Gm12253Q5NC48 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm12253Q5NC48 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Gm12253Q5NC48 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm12253Q5NC48 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm12253Q5NC48 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
Gm12253Q5NC48 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm12253Q5NC48 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm12253Q5NC48 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm12253Q5NC48 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm12253Q5NC48 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm12253Q5NC48 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm12253Q5NC48 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm12253Q5NC48 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.35■■□□□ 1.01
Gm12253Q5NC48 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.35■■□□□ 1.01
Gm12253Q5NC48 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.35■■□□□ 1.01
Gm12253Q5NC48 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm12253Q5NC48 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm12253Q5NC48 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm12253Q5NC48 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.33■■□□□ 1
Gm12253Q5NC48 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm12253Q5NC48 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm12253Q5NC48 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm12253Q5NC48 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm12253Q5NC48 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm12253Q5NC48 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm12253Q5NC48 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm12253Q5NC48 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.3■■□□□ 1
Gm12253Q5NC48 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm12253Q5NC48 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Gm12253Q5NC48 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm12253Q5NC48 Gm8503-201ENSMUST00000118131 455 ntBASIC21.28■■□□□ 1
Gm12253Q5NC48 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Gm12253Q5NC48 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Gm12253Q5NC48 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.27■■□□□ 1
Gm12253Q5NC48 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm12253Q5NC48 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm12253Q5NC48 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm12253Q5NC48 Gm6821-201ENSMUST00000107540 542 ntBASIC21.25■□□□□ 0.99
Gm12253Q5NC48 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm12253Q5NC48 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Gm12253Q5NC48 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm12253Q5NC48 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.23■□□□□ 0.99
Gm12253Q5NC48 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm12253Q5NC48 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm12253Q5NC48 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.23■□□□□ 0.99
Gm12253Q5NC48 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm12253Q5NC48 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm12253Q5NC48 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm12253Q5NC48 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Gm12253Q5NC48 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm12253Q5NC48 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.2■□□□□ 0.98
Gm12253Q5NC48 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.2■□□□□ 0.98
Gm12253Q5NC48 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm12253Q5NC48 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm12253Q5NC48 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.19■□□□□ 0.98
Gm12253Q5NC48 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm12253Q5NC48 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm12253Q5NC48 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm12253Q5NC48 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm12253Q5NC48 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm12253Q5NC48 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm12253Q5NC48 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm12253Q5NC48 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm12253Q5NC48 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.16■□□□□ 0.98
Gm12253Q5NC48 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm12253Q5NC48 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm12253Q5NC48 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gm12253Q5NC48 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm12253Q5NC48 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm12253Q5NC48 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm12253Q5NC48 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm12253Q5NC48 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm12253Q5NC48 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Gm12253Q5NC48 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm12253Q5NC48 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.12■□□□□ 0.97
Gm12253Q5NC48 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms