Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Vps13aQ5H8C4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Vps13aQ5H8C4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Vps13aQ5H8C4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.69■■□□□ 1.7
Vps13aQ5H8C4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.68■■□□□ 1.7
Vps13aQ5H8C4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Vps13aQ5H8C4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Vps13aQ5H8C4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Vps13aQ5H8C4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Vps13aQ5H8C4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
Vps13aQ5H8C4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Vps13aQ5H8C4 Nkain2-201ENSMUST00000092602 558 ntBASIC25.66■■□□□ 1.7
Vps13aQ5H8C4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Vps13aQ5H8C4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Vps13aQ5H8C4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
Vps13aQ5H8C4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Vps13aQ5H8C4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Vps13aQ5H8C4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Vps13aQ5H8C4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
Vps13aQ5H8C4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Vps13aQ5H8C4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Vps13aQ5H8C4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Vps13aQ5H8C4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Vps13aQ5H8C4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
Vps13aQ5H8C4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Vps13aQ5H8C4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Vps13aQ5H8C4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Vps13aQ5H8C4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Vps13aQ5H8C4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Vps13aQ5H8C4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Vps13aQ5H8C4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Vps13aQ5H8C4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Vps13aQ5H8C4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Vps13aQ5H8C4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Vps13aQ5H8C4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.48■■□□□ 1.67
Vps13aQ5H8C4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.48■■□□□ 1.67
Vps13aQ5H8C4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.48■■□□□ 1.67
Vps13aQ5H8C4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Vps13aQ5H8C4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.47■■□□□ 1.67
Vps13aQ5H8C4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Vps13aQ5H8C4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Vps13aQ5H8C4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Vps13aQ5H8C4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.42■■□□□ 1.66
Vps13aQ5H8C4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Vps13aQ5H8C4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Vps13aQ5H8C4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Vps13aQ5H8C4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Vps13aQ5H8C4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Vps13aQ5H8C4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Vps13aQ5H8C4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.37■■□□□ 1.65
Vps13aQ5H8C4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.36■■□□□ 1.65
Vps13aQ5H8C4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Vps13aQ5H8C4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Vps13aQ5H8C4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Vps13aQ5H8C4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Vps13aQ5H8C4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Vps13aQ5H8C4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.33■■□□□ 1.65
Vps13aQ5H8C4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Vps13aQ5H8C4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Vps13aQ5H8C4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.33■■□□□ 1.65
Vps13aQ5H8C4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.32■■□□□ 1.64
Vps13aQ5H8C4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Vps13aQ5H8C4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Vps13aQ5H8C4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Vps13aQ5H8C4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Vps13aQ5H8C4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Vps13aQ5H8C4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.28■■□□□ 1.64
Vps13aQ5H8C4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Vps13aQ5H8C4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Vps13aQ5H8C4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Vps13aQ5H8C4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Vps13aQ5H8C4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Vps13aQ5H8C4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Vps13aQ5H8C4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Vps13aQ5H8C4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Vps13aQ5H8C4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Vps13aQ5H8C4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Vps13aQ5H8C4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Vps13aQ5H8C4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Vps13aQ5H8C4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.23■■□□□ 1.63
Vps13aQ5H8C4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Vps13aQ5H8C4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Vps13aQ5H8C4 Gm6311-201ENSMUST00000073790 878 ntBASIC25.22■■□□□ 1.63
Vps13aQ5H8C4 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.22■■□□□ 1.63
Vps13aQ5H8C4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Vps13aQ5H8C4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Vps13aQ5H8C4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Vps13aQ5H8C4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vps13aQ5H8C4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vps13aQ5H8C4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Vps13aQ5H8C4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.19■■□□□ 1.62
Vps13aQ5H8C4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.19■■□□□ 1.62
Vps13aQ5H8C4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.19■■□□□ 1.62
Vps13aQ5H8C4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
Vps13aQ5H8C4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Vps13aQ5H8C4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Vps13aQ5H8C4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Vps13aQ5H8C4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.17■■□□□ 1.62
Vps13aQ5H8C4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Vps13aQ5H8C4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms