Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cdkl5Q3UTQ8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cdkl5Q3UTQ8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Cdkl5Q3UTQ8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.83■■■□□ 2.2
Cdkl5Q3UTQ8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Cdkl5Q3UTQ8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.8■■■□□ 2.2
Cdkl5Q3UTQ8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.79■■■□□ 2.2
Cdkl5Q3UTQ8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Cdkl5Q3UTQ8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Cdkl5Q3UTQ8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Cdkl5Q3UTQ8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Cdkl5Q3UTQ8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Cdkl5Q3UTQ8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Cdkl5Q3UTQ8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Cdkl5Q3UTQ8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Cdkl5Q3UTQ8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Cdkl5Q3UTQ8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Cdkl5Q3UTQ8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Cdkl5Q3UTQ8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.75■■■□□ 2.19
Cdkl5Q3UTQ8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.75■■■□□ 2.19
Cdkl5Q3UTQ8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.74■■■□□ 2.19
Cdkl5Q3UTQ8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Cdkl5Q3UTQ8 Zfp131-205ENSMUST00000223812 663 ntBASIC28.74■■■□□ 2.19
Cdkl5Q3UTQ8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.73■■■□□ 2.19
Cdkl5Q3UTQ8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Cdkl5Q3UTQ8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cdkl5Q3UTQ8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Cdkl5Q3UTQ8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Cdkl5Q3UTQ8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.69■■■□□ 2.18
Cdkl5Q3UTQ8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.67■■■□□ 2.18
Cdkl5Q3UTQ8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Cdkl5Q3UTQ8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Cdkl5Q3UTQ8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
Cdkl5Q3UTQ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.65■■■□□ 2.18
Cdkl5Q3UTQ8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Cdkl5Q3UTQ8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.63■■■□□ 2.17
Cdkl5Q3UTQ8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Cdkl5Q3UTQ8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Cdkl5Q3UTQ8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.6■■■□□ 2.17
Cdkl5Q3UTQ8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.6■■■□□ 2.17
Cdkl5Q3UTQ8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Cdkl5Q3UTQ8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cdkl5Q3UTQ8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cdkl5Q3UTQ8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.59■■■□□ 2.17
Cdkl5Q3UTQ8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Cdkl5Q3UTQ8 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.57■■■□□ 2.16
Cdkl5Q3UTQ8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Cdkl5Q3UTQ8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cdkl5Q3UTQ8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Cdkl5Q3UTQ8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.52■■■□□ 2.16
Cdkl5Q3UTQ8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cdkl5Q3UTQ8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
Cdkl5Q3UTQ8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cdkl5Q3UTQ8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cdkl5Q3UTQ8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.5■■■□□ 2.15
Cdkl5Q3UTQ8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cdkl5Q3UTQ8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cdkl5Q3UTQ8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cdkl5Q3UTQ8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cdkl5Q3UTQ8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Cdkl5Q3UTQ8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.48■■■□□ 2.15
Cdkl5Q3UTQ8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cdkl5Q3UTQ8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cdkl5Q3UTQ8 Gm9397-201ENSMUST00000200125 605 ntBASIC28.47■■■□□ 2.15
Cdkl5Q3UTQ8 Amer2-203ENSMUST00000225247 2662 ntBASIC28.46■■■□□ 2.15
Cdkl5Q3UTQ8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.46■■■□□ 2.15
Cdkl5Q3UTQ8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.46■■■□□ 2.15
Cdkl5Q3UTQ8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cdkl5Q3UTQ8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Cdkl5Q3UTQ8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Cdkl5Q3UTQ8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.43■■■□□ 2.14
Cdkl5Q3UTQ8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Cdkl5Q3UTQ8 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.43■■■□□ 2.14
Cdkl5Q3UTQ8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cdkl5Q3UTQ8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cdkl5Q3UTQ8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.42■■■□□ 2.14
Cdkl5Q3UTQ8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
Cdkl5Q3UTQ8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cdkl5Q3UTQ8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28.41■■■□□ 2.14
Cdkl5Q3UTQ8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cdkl5Q3UTQ8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.4■■■□□ 2.14
Cdkl5Q3UTQ8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cdkl5Q3UTQ8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Cdkl5Q3UTQ8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Cdkl5Q3UTQ8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Cdkl5Q3UTQ8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Cdkl5Q3UTQ8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cdkl5Q3UTQ8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cdkl5Q3UTQ8 Gm24970-201ENSMUST00000175582 82 ntBASIC28.36■■■□□ 2.13
Cdkl5Q3UTQ8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.36■■■□□ 2.13
Cdkl5Q3UTQ8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cdkl5Q3UTQ8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cdkl5Q3UTQ8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Cdkl5Q3UTQ8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cdkl5Q3UTQ8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cdkl5Q3UTQ8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cdkl5Q3UTQ8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Cdkl5Q3UTQ8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cdkl5Q3UTQ8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cdkl5Q3UTQ8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.32■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms