Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,84■■■□□ 2,21
Cdkl5Q3UTQ8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,83■■■□□ 2,21
Cdkl5Q3UTQ8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28,83■■■□□ 2,21
Cdkl5Q3UTQ8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28,83■■■□□ 2,2
Cdkl5Q3UTQ8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28,82■■■□□ 2,2
Cdkl5Q3UTQ8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28,8■■■□□ 2,2
Cdkl5Q3UTQ8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28,79■■■□□ 2,2
Cdkl5Q3UTQ8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28,78■■■□□ 2,2
Cdkl5Q3UTQ8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28,78■■■□□ 2,2
Cdkl5Q3UTQ8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28,77■■■□□ 2,2
Cdkl5Q3UTQ8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28,77■■■□□ 2,2
Cdkl5Q3UTQ8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28,77■■■□□ 2,2
Cdkl5Q3UTQ8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28,77■■■□□ 2,2
Cdkl5Q3UTQ8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28,77■■■□□ 2,2
Cdkl5Q3UTQ8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Cdkl5Q3UTQ8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28,76■■■□□ 2,19
Cdkl5Q3UTQ8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28,75■■■□□ 2,19
Cdkl5Q3UTQ8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28,75■■■□□ 2,19
Cdkl5Q3UTQ8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28,75■■■□□ 2,19
Cdkl5Q3UTQ8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28,75■■■□□ 2,19
Cdkl5Q3UTQ8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28,74■■■□□ 2,19
Cdkl5Q3UTQ8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28,74■■■□□ 2,19
Cdkl5Q3UTQ8 Zfp131-205ENSMUST00000223812 663 ntBASIC28,74■■■□□ 2,19
Cdkl5Q3UTQ8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28,73■■■□□ 2,19
Cdkl5Q3UTQ8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28,73■■■□□ 2,19
Cdkl5Q3UTQ8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Cdkl5Q3UTQ8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Cdkl5Q3UTQ8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28,7■■■□□ 2,19
Cdkl5Q3UTQ8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28,69■■■□□ 2,18
Cdkl5Q3UTQ8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28,67■■■□□ 2,18
Cdkl5Q3UTQ8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Cdkl5Q3UTQ8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Cdkl5Q3UTQ8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28,65■■■□□ 2,18
Cdkl5Q3UTQ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28,65■■■□□ 2,18
Cdkl5Q3UTQ8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
Cdkl5Q3UTQ8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28,63■■■□□ 2,17
Cdkl5Q3UTQ8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Cdkl5Q3UTQ8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28,61■■■□□ 2,17
Cdkl5Q3UTQ8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28,6■■■□□ 2,17
Cdkl5Q3UTQ8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28,6■■■□□ 2,17
Cdkl5Q3UTQ8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28,59■■■□□ 2,17
Cdkl5Q3UTQ8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Cdkl5Q3UTQ8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Cdkl5Q3UTQ8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28,59■■■□□ 2,17
Cdkl5Q3UTQ8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Cdkl5Q3UTQ8 Tdp2-203ENSMUST00000223804 1136 ntBASIC28,57■■■□□ 2,16
Cdkl5Q3UTQ8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Cdkl5Q3UTQ8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28,56■■■□□ 2,16
Cdkl5Q3UTQ8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28,53■■■□□ 2,16
Cdkl5Q3UTQ8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28,52■■■□□ 2,16
Cdkl5Q3UTQ8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Cdkl5Q3UTQ8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28,51■■■□□ 2,16
Cdkl5Q3UTQ8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28,51■■■□□ 2,15
Cdkl5Q3UTQ8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28,51■■■□□ 2,15
Cdkl5Q3UTQ8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28,5■■■□□ 2,15
Cdkl5Q3UTQ8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Cdkl5Q3UTQ8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28,5■■■□□ 2,15
Cdkl5Q3UTQ8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Cdkl5Q3UTQ8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28,49■■■□□ 2,15
Cdkl5Q3UTQ8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
Cdkl5Q3UTQ8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28,48■■■□□ 2,15
Cdkl5Q3UTQ8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Cdkl5Q3UTQ8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28,48■■■□□ 2,15
Cdkl5Q3UTQ8 Gm9397-201ENSMUST00000200125 605 ntBASIC28,47■■■□□ 2,15
Cdkl5Q3UTQ8 Amer2-203ENSMUST00000225247 2662 ntBASIC28,46■■■□□ 2,15
Cdkl5Q3UTQ8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28,46■■■□□ 2,15
Cdkl5Q3UTQ8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28,46■■■□□ 2,15
Cdkl5Q3UTQ8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Cdkl5Q3UTQ8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,15
Cdkl5Q3UTQ8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28,44■■■□□ 2,14
Cdkl5Q3UTQ8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28,43■■■□□ 2,14
Cdkl5Q3UTQ8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28,43■■■□□ 2,14
Cdkl5Q3UTQ8 Gm43863-201ENSMUST00000203822 1192 ntBASIC28,43■■■□□ 2,14
Cdkl5Q3UTQ8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28,43■■■□□ 2,14
Cdkl5Q3UTQ8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Cdkl5Q3UTQ8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28,42■■■□□ 2,14
Cdkl5Q3UTQ8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28,42■■■□□ 2,14
Cdkl5Q3UTQ8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Cdkl5Q3UTQ8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28,41■■■□□ 2,14
Cdkl5Q3UTQ8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28,4■■■□□ 2,14
Cdkl5Q3UTQ8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28,4■■■□□ 2,14
Cdkl5Q3UTQ8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Cdkl5Q3UTQ8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28,39■■■□□ 2,13
Cdkl5Q3UTQ8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,13
Cdkl5Q3UTQ8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28,38■■■□□ 2,13
Cdkl5Q3UTQ8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28,37■■■□□ 2,13
Cdkl5Q3UTQ8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28,36■■■□□ 2,13
Cdkl5Q3UTQ8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Cdkl5Q3UTQ8 Gm24970-201ENSMUST00000175582 82 ntBASIC28,36■■■□□ 2,13
Cdkl5Q3UTQ8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28,36■■■□□ 2,13
Cdkl5Q3UTQ8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28,36■■■□□ 2,13
Cdkl5Q3UTQ8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Cdkl5Q3UTQ8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28,35■■■□□ 2,13
Cdkl5Q3UTQ8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28,34■■■□□ 2,13
Cdkl5Q3UTQ8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28,34■■■□□ 2,13
Cdkl5Q3UTQ8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Cdkl5Q3UTQ8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28,33■■■□□ 2,13
Cdkl5Q3UTQ8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Cdkl5Q3UTQ8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Cdkl5Q3UTQ8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28,32■■■□□ 2,12
Retrieved 100 of 76,532 protein–RNA pairs in 12,1 ms