Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Uspl1Q3ULM6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Uspl1Q3ULM6 Gm6206-201ENSMUST00000133472 2199 ntBASIC32.69■■■□□ 2.82
Uspl1Q3ULM6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC32.69■■■□□ 2.82
Uspl1Q3ULM6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Uspl1Q3ULM6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Uspl1Q3ULM6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Uspl1Q3ULM6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Uspl1Q3ULM6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Uspl1Q3ULM6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
Uspl1Q3ULM6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Uspl1Q3ULM6 Gm43445-201ENSMUST00000198564 2091 ntBASIC32.65■■■□□ 2.82
Uspl1Q3ULM6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Uspl1Q3ULM6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Uspl1Q3ULM6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Uspl1Q3ULM6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC32.63■■■□□ 2.81
Uspl1Q3ULM6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Uspl1Q3ULM6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Uspl1Q3ULM6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.62■■■□□ 2.81
Uspl1Q3ULM6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Uspl1Q3ULM6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Uspl1Q3ULM6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.6■■■□□ 2.81
Uspl1Q3ULM6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Uspl1Q3ULM6 Gm9905-201ENSMUST00000065740 1845 ntBASIC32.57■■■□□ 2.8
Uspl1Q3ULM6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32.57■■■□□ 2.8
Uspl1Q3ULM6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Uspl1Q3ULM6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC32.55■■■□□ 2.8
Uspl1Q3ULM6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Uspl1Q3ULM6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32.53■■■□□ 2.8
Uspl1Q3ULM6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Uspl1Q3ULM6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Uspl1Q3ULM6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC32.52■■■□□ 2.8
Uspl1Q3ULM6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
Uspl1Q3ULM6 Gm45855-201ENSMUST00000212546 880 ntBASIC32.5■■■□□ 2.79
Uspl1Q3ULM6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Uspl1Q3ULM6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC32.5■■■□□ 2.79
Uspl1Q3ULM6 Gm24970-201ENSMUST00000175582 82 ntBASIC32.49■■■□□ 2.79
Uspl1Q3ULM6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Uspl1Q3ULM6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Uspl1Q3ULM6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Uspl1Q3ULM6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
Uspl1Q3ULM6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC32.47■■■□□ 2.79
Uspl1Q3ULM6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Uspl1Q3ULM6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
Uspl1Q3ULM6 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.47■■■□□ 2.79
Uspl1Q3ULM6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Uspl1Q3ULM6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
Uspl1Q3ULM6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC32.44■■■□□ 2.78
Uspl1Q3ULM6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC32.44■■■□□ 2.78
Uspl1Q3ULM6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Uspl1Q3ULM6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Uspl1Q3ULM6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Uspl1Q3ULM6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Uspl1Q3ULM6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC32.4■■■□□ 2.78
Uspl1Q3ULM6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32.4■■■□□ 2.78
Uspl1Q3ULM6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Uspl1Q3ULM6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
Uspl1Q3ULM6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Uspl1Q3ULM6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.37■■■□□ 2.77
Uspl1Q3ULM6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Uspl1Q3ULM6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Uspl1Q3ULM6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC32.35■■■□□ 2.77
Uspl1Q3ULM6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Uspl1Q3ULM6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.35■■■□□ 2.77
Uspl1Q3ULM6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Uspl1Q3ULM6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC32.35■■■□□ 2.77
Uspl1Q3ULM6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Uspl1Q3ULM6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Uspl1Q3ULM6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Uspl1Q3ULM6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC32.32■■■□□ 2.77
Uspl1Q3ULM6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.77
Uspl1Q3ULM6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Uspl1Q3ULM6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32.31■■■□□ 2.76
Uspl1Q3ULM6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Uspl1Q3ULM6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC32.3■■■□□ 2.76
Uspl1Q3ULM6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC32.29■■■□□ 2.76
Uspl1Q3ULM6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Uspl1Q3ULM6 AC157572.2-201ENSMUST00000226970 908 ntBASIC32.27■■■□□ 2.76
Uspl1Q3ULM6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Uspl1Q3ULM6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Uspl1Q3ULM6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Uspl1Q3ULM6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32.23■■■□□ 2.75
Uspl1Q3ULM6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Uspl1Q3ULM6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Uspl1Q3ULM6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Uspl1Q3ULM6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Uspl1Q3ULM6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
Uspl1Q3ULM6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Uspl1Q3ULM6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Uspl1Q3ULM6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Uspl1Q3ULM6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Uspl1Q3ULM6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Uspl1Q3ULM6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Uspl1Q3ULM6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
Uspl1Q3ULM6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Uspl1Q3ULM6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Uspl1Q3ULM6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
Uspl1Q3ULM6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Uspl1Q3ULM6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
Uspl1Q3ULM6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms