Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrkdcP97313 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrkdcP97313 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
PrkdcP97313 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.98■□□□□ 0.47
PrkdcP97313 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PrkdcP97313 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.97■□□□□ 0.47
PrkdcP97313 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PrkdcP97313 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PrkdcP97313 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.94■□□□□ 0.46
PrkdcP97313 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PrkdcP97313 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.93■□□□□ 0.46
PrkdcP97313 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PrkdcP97313 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PrkdcP97313 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PrkdcP97313 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PrkdcP97313 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
PrkdcP97313 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrkdcP97313 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.89■□□□□ 0.45
PrkdcP97313 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PrkdcP97313 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrkdcP97313 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PrkdcP97313 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PrkdcP97313 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PrkdcP97313 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PrkdcP97313 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PrkdcP97313 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.86■□□□□ 0.45
PrkdcP97313 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.86■□□□□ 0.45
PrkdcP97313 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PrkdcP97313 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.83■□□□□ 0.45
PrkdcP97313 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.83■□□□□ 0.44
PrkdcP97313 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PrkdcP97313 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PrkdcP97313 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PrkdcP97313 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PrkdcP97313 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PrkdcP97313 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.81■□□□□ 0.44
PrkdcP97313 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PrkdcP97313 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.8■□□□□ 0.44
PrkdcP97313 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PrkdcP97313 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PrkdcP97313 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PrkdcP97313 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrkdcP97313 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrkdcP97313 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PrkdcP97313 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PrkdcP97313 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PrkdcP97313 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
PrkdcP97313 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PrkdcP97313 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PrkdcP97313 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PrkdcP97313 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PrkdcP97313 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PrkdcP97313 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.74■□□□□ 0.43
PrkdcP97313 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.73■□□□□ 0.43
PrkdcP97313 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PrkdcP97313 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PrkdcP97313 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PrkdcP97313 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PrkdcP97313 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PrkdcP97313 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PrkdcP97313 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PrkdcP97313 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PrkdcP97313 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PrkdcP97313 Gm6311-201ENSMUST00000073790 878 ntBASIC17.7■□□□□ 0.42
PrkdcP97313 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PrkdcP97313 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PrkdcP97313 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.7■□□□□ 0.42
PrkdcP97313 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PrkdcP97313 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PrkdcP97313 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PrkdcP97313 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PrkdcP97313 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PrkdcP97313 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrkdcP97313 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrkdcP97313 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrkdcP97313 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PrkdcP97313 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PrkdcP97313 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PrkdcP97313 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.66■□□□□ 0.42
PrkdcP97313 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PrkdcP97313 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.66■□□□□ 0.42
PrkdcP97313 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PrkdcP97313 Gm22567-201ENSMUST00000175542 342 ntBASIC17.65■□□□□ 0.42
PrkdcP97313 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PrkdcP97313 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PrkdcP97313 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.64■□□□□ 0.41
PrkdcP97313 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
PrkdcP97313 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PrkdcP97313 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PrkdcP97313 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.63■□□□□ 0.41
PrkdcP97313 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PrkdcP97313 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PrkdcP97313 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms