Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Six5P70178 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Six5P70178 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Six5P70178 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Six5P70178 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.2■■□□□ 1.3
Six5P70178 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Six5P70178 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Six5P70178 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Six5P70178 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Six5P70178 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Six5P70178 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.17■■□□□ 1.3
Six5P70178 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.15■■□□□ 1.3
Six5P70178 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Six5P70178 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Six5P70178 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Six5P70178 Gm9397-201ENSMUST00000200125 605 ntBASIC23.14■■□□□ 1.29
Six5P70178 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
Six5P70178 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.13■■□□□ 1.29
Six5P70178 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Six5P70178 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.12■■□□□ 1.29
Six5P70178 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
Six5P70178 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Six5P70178 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Six5P70178 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Six5P70178 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.11■■□□□ 1.29
Six5P70178 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Six5P70178 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Six5P70178 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Six5P70178 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Six5P70178 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Six5P70178 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Six5P70178 Gm24970-201ENSMUST00000175582 82 ntBASIC23.05■■□□□ 1.28
Six5P70178 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Six5P70178 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Six5P70178 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.04■■□□□ 1.28
Six5P70178 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Six5P70178 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.03■■□□□ 1.28
Six5P70178 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.03■■□□□ 1.28
Six5P70178 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Six5P70178 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.02■■□□□ 1.28
Six5P70178 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.02■■□□□ 1.28
Six5P70178 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.02■■□□□ 1.28
Six5P70178 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.01■■□□□ 1.27
Six5P70178 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Six5P70178 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.01■■□□□ 1.27
Six5P70178 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Six5P70178 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Six5P70178 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23■■□□□ 1.27
Six5P70178 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Six5P70178 Gm45855-201ENSMUST00000212546 880 ntBASIC22.99■■□□□ 1.27
Six5P70178 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Six5P70178 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Six5P70178 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.97■■□□□ 1.27
Six5P70178 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Six5P70178 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Six5P70178 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Six5P70178 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.97■■□□□ 1.27
Six5P70178 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Six5P70178 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.96■■□□□ 1.27
Six5P70178 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.96■■□□□ 1.27
Six5P70178 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Six5P70178 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Six5P70178 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Six5P70178 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Six5P70178 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Six5P70178 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.94■■□□□ 1.26
Six5P70178 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Six5P70178 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.94■■□□□ 1.26
Six5P70178 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Six5P70178 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Six5P70178 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Six5P70178 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Six5P70178 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.9■■□□□ 1.26
Six5P70178 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.89■■□□□ 1.26
Six5P70178 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Six5P70178 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Six5P70178 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Six5P70178 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Six5P70178 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Six5P70178 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Six5P70178 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Six5P70178 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
Six5P70178 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Six5P70178 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Six5P70178 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.83■■□□□ 1.24
Six5P70178 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Six5P70178 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Six5P70178 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Six5P70178 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Six5P70178 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Six5P70178 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Six5P70178 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Six5P70178 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Six5P70178 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Six5P70178 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Six5P70178 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Six5P70178 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
Six5P70178 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Six5P70178 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Six5P70178 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms