Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.87■■□□□ 1.25
Sox6P40645 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sox6P40645 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sox6P40645 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.86■■□□□ 1.25
Sox6P40645 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sox6P40645 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sox6P40645 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sox6P40645 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Sox6P40645 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
Sox6P40645 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sox6P40645 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Sox6P40645 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.82■■□□□ 1.24
Sox6P40645 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.81■■□□□ 1.24
Sox6P40645 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sox6P40645 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Sox6P40645 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Sox6P40645 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sox6P40645 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sox6P40645 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sox6P40645 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sox6P40645 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Sox6P40645 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Sox6P40645 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
Sox6P40645 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Sox6P40645 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Sox6P40645 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sox6P40645 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sox6P40645 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sox6P40645 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sox6P40645 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Sox6P40645 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sox6P40645 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Sox6P40645 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sox6P40645 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Sox6P40645 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sox6P40645 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Sox6P40645 Zfp131-205ENSMUST00000223812 663 ntBASIC22.71■■□□□ 1.23
Sox6P40645 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sox6P40645 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sox6P40645 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Sox6P40645 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Sox6P40645 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sox6P40645 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.69■■□□□ 1.22
Sox6P40645 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sox6P40645 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.69■■□□□ 1.22
Sox6P40645 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Sox6P40645 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sox6P40645 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.68■■□□□ 1.22
Sox6P40645 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sox6P40645 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.68■■□□□ 1.22
Sox6P40645 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sox6P40645 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Sox6P40645 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.65■■□□□ 1.22
Sox6P40645 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Sox6P40645 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sox6P40645 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sox6P40645 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sox6P40645 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sox6P40645 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox6P40645 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox6P40645 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sox6P40645 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sox6P40645 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sox6P40645 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sox6P40645 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sox6P40645 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sox6P40645 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sox6P40645 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Sox6P40645 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.59■■□□□ 1.21
Sox6P40645 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sox6P40645 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.58■■□□□ 1.21
Sox6P40645 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Sox6P40645 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox6P40645 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox6P40645 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sox6P40645 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Sox6P40645 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox6P40645 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sox6P40645 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sox6P40645 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.54■■□□□ 1.2
Sox6P40645 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.53■■□□□ 1.2
Sox6P40645 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.53■■□□□ 1.2
Sox6P40645 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sox6P40645 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Sox6P40645 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Sox6P40645 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.52■■□□□ 1.19
Sox6P40645 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox6P40645 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sox6P40645 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sox6P40645 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.49■■□□□ 1.19
Sox6P40645 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.49■■□□□ 1.19
Sox6P40645 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sox6P40645 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.48■■□□□ 1.19
Sox6P40645 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.48■■□□□ 1.19
Sox6P40645 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sox6P40645 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox6P40645 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sox6P40645 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.47■■□□□ 1.19
Sox6P40645 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Sox6P40645 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms