Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HmgclP38060 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HmgclP38060 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
HmgclP38060 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
HmgclP38060 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
HmgclP38060 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HmgclP38060 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.64■■□□□ 1.54
HmgclP38060 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.62■■□□□ 1.53
HmgclP38060 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HmgclP38060 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
HmgclP38060 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HmgclP38060 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HmgclP38060 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HmgclP38060 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HmgclP38060 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.6■■□□□ 1.53
HmgclP38060 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.6■■□□□ 1.53
HmgclP38060 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.6■■□□□ 1.53
HmgclP38060 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HmgclP38060 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HmgclP38060 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
HmgclP38060 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HmgclP38060 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HmgclP38060 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
HmgclP38060 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HmgclP38060 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HmgclP38060 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HmgclP38060 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.54■■□□□ 1.52
HmgclP38060 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.54■■□□□ 1.52
HmgclP38060 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HmgclP38060 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HmgclP38060 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.53■■□□□ 1.52
HmgclP38060 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.51■■□□□ 1.51
HmgclP38060 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HmgclP38060 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.5■■□□□ 1.51
HmgclP38060 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.49■■□□□ 1.51
HmgclP38060 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HmgclP38060 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.47■■□□□ 1.51
HmgclP38060 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HmgclP38060 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.47■■□□□ 1.51
HmgclP38060 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
HmgclP38060 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HmgclP38060 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
HmgclP38060 Gm9397-201ENSMUST00000200125 605 ntBASIC24.45■■□□□ 1.5
HmgclP38060 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HmgclP38060 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.45■■□□□ 1.5
HmgclP38060 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HmgclP38060 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
HmgclP38060 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
HmgclP38060 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HmgclP38060 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HmgclP38060 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.38■■□□□ 1.49
HmgclP38060 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HmgclP38060 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
HmgclP38060 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HmgclP38060 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.37■■□□□ 1.49
HmgclP38060 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.37■■□□□ 1.49
HmgclP38060 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
HmgclP38060 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
HmgclP38060 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.36■■□□□ 1.49
HmgclP38060 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HmgclP38060 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HmgclP38060 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HmgclP38060 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.35■■□□□ 1.49
HmgclP38060 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HmgclP38060 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HmgclP38060 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
HmgclP38060 Gm24970-201ENSMUST00000175582 82 ntBASIC24.34■■□□□ 1.49
HmgclP38060 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
HmgclP38060 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
HmgclP38060 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HmgclP38060 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HmgclP38060 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.31■■□□□ 1.48
HmgclP38060 Gm45855-201ENSMUST00000212546 880 ntBASIC24.31■■□□□ 1.48
HmgclP38060 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HmgclP38060 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
HmgclP38060 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
HmgclP38060 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
HmgclP38060 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HmgclP38060 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HmgclP38060 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HmgclP38060 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HmgclP38060 Amer2-203ENSMUST00000225247 2662 ntBASIC24.29■■□□□ 1.48
HmgclP38060 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HmgclP38060 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.29■■□□□ 1.48
HmgclP38060 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.28■■□□□ 1.48
HmgclP38060 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
HmgclP38060 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HmgclP38060 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
HmgclP38060 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
HmgclP38060 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HmgclP38060 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HmgclP38060 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.26■■□□□ 1.47
HmgclP38060 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
HmgclP38060 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.25■■□□□ 1.47
HmgclP38060 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HmgclP38060 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.24■■□□□ 1.47
HmgclP38060 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.24■■□□□ 1.47
HmgclP38060 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HmgclP38060 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
HmgclP38060 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms