Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc28a2O88627 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc28a2O88627 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc28a2O88627 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc28a2O88627 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Slc28a2O88627 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Slc28a2O88627 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc28a2O88627 Amer2-203ENSMUST00000225247 2662 ntBASIC21.66■■□□□ 1.06
Slc28a2O88627 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc28a2O88627 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc28a2O88627 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.65■■□□□ 1.06
Slc28a2O88627 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc28a2O88627 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Slc28a2O88627 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc28a2O88627 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Slc28a2O88627 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Slc28a2O88627 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Slc28a2O88627 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc28a2O88627 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Slc28a2O88627 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Slc28a2O88627 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc28a2O88627 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Slc28a2O88627 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc28a2O88627 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc28a2O88627 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc28a2O88627 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Slc28a2O88627 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.58■■□□□ 1.05
Slc28a2O88627 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc28a2O88627 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Slc28a2O88627 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.57■■□□□ 1.04
Slc28a2O88627 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Slc28a2O88627 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc28a2O88627 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.54■■□□□ 1.04
Slc28a2O88627 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.54■■□□□ 1.04
Slc28a2O88627 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc28a2O88627 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Slc28a2O88627 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Slc28a2O88627 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc28a2O88627 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc28a2O88627 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc28a2O88627 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc28a2O88627 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Slc28a2O88627 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Slc28a2O88627 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc28a2O88627 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Slc28a2O88627 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Slc28a2O88627 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc28a2O88627 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Slc28a2O88627 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc28a2O88627 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc28a2O88627 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc28a2O88627 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.46■■□□□ 1.03
Slc28a2O88627 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc28a2O88627 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc28a2O88627 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc28a2O88627 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc28a2O88627 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc28a2O88627 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc28a2O88627 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Slc28a2O88627 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.44■■□□□ 1.02
Slc28a2O88627 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc28a2O88627 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc28a2O88627 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Slc28a2O88627 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc28a2O88627 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc28a2O88627 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc28a2O88627 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc28a2O88627 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc28a2O88627 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc28a2O88627 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc28a2O88627 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Slc28a2O88627 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Slc28a2O88627 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc28a2O88627 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Slc28a2O88627 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc28a2O88627 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.36■■□□□ 1.01
Slc28a2O88627 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc28a2O88627 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.36■■□□□ 1.01
Slc28a2O88627 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc28a2O88627 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc28a2O88627 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc28a2O88627 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc28a2O88627 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc28a2O88627 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc28a2O88627 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc28a2O88627 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc28a2O88627 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms