Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc28a2O88627 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc28a2O88627 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc28a2O88627 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc28a2O88627 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Slc28a2O88627 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Slc28a2O88627 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc28a2O88627 Amer2-203ENSMUST00000225247 2662 ntBASIC21.66■■□□□ 1.06
Slc28a2O88627 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc28a2O88627 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc28a2O88627 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.65■■□□□ 1.06
Slc28a2O88627 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc28a2O88627 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Slc28a2O88627 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc28a2O88627 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Slc28a2O88627 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Slc28a2O88627 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Slc28a2O88627 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc28a2O88627 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Slc28a2O88627 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Slc28a2O88627 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc28a2O88627 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Slc28a2O88627 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc28a2O88627 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc28a2O88627 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc28a2O88627 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Slc28a2O88627 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.58■■□□□ 1.05
Slc28a2O88627 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Slc28a2O88627 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Slc28a2O88627 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.57■■□□□ 1.04
Slc28a2O88627 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Slc28a2O88627 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc28a2O88627 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.54■■□□□ 1.04
Slc28a2O88627 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.54■■□□□ 1.04
Slc28a2O88627 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc28a2O88627 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc28a2O88627 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Slc28a2O88627 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Slc28a2O88627 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc28a2O88627 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc28a2O88627 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc28a2O88627 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc28a2O88627 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Slc28a2O88627 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Slc28a2O88627 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc28a2O88627 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Slc28a2O88627 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Slc28a2O88627 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc28a2O88627 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Slc28a2O88627 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc28a2O88627 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc28a2O88627 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slc28a2O88627 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.46■■□□□ 1.03
Slc28a2O88627 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc28a2O88627 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc28a2O88627 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc28a2O88627 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc28a2O88627 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc28a2O88627 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc28a2O88627 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Slc28a2O88627 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.44■■□□□ 1.02
Slc28a2O88627 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc28a2O88627 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc28a2O88627 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Slc28a2O88627 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc28a2O88627 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc28a2O88627 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc28a2O88627 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc28a2O88627 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc28a2O88627 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc28a2O88627 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc28a2O88627 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Slc28a2O88627 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Slc28a2O88627 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc28a2O88627 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc28a2O88627 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Slc28a2O88627 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc28a2O88627 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.36■■□□□ 1.01
Slc28a2O88627 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc28a2O88627 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.36■■□□□ 1.01
Slc28a2O88627 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc28a2O88627 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Slc28a2O88627 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc28a2O88627 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc28a2O88627 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc28a2O88627 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc28a2O88627 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc28a2O88627 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc28a2O88627 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms