Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ndufb11O09111 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ndufb11O09111 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ndufb11O09111 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ndufb11O09111 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.84■□□□□ 0.77
Ndufb11O09111 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ndufb11O09111 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ndufb11O09111 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ndufb11O09111 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.83■□□□□ 0.76
Ndufb11O09111 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ndufb11O09111 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ndufb11O09111 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ndufb11O09111 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ndufb11O09111 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndufb11O09111 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndufb11O09111 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndufb11O09111 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ndufb11O09111 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndufb11O09111 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndufb11O09111 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndufb11O09111 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ndufb11O09111 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ndufb11O09111 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Ndufb11O09111 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ndufb11O09111 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ndufb11O09111 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ndufb11O09111 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ndufb11O09111 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndufb11O09111 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ndufb11O09111 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ndufb11O09111 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ndufb11O09111 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ndufb11O09111 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ndufb11O09111 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ndufb11O09111 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.74■□□□□ 0.75
Ndufb11O09111 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ndufb11O09111 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ndufb11O09111 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ndufb11O09111 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndufb11O09111 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndufb11O09111 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndufb11O09111 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndufb11O09111 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndufb11O09111 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ndufb11O09111 Gm27325-201ENSMUST00000175467 74 ntBASIC19.7■□□□□ 0.74
Ndufb11O09111 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ndufb11O09111 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndufb11O09111 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ndufb11O09111 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndufb11O09111 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndufb11O09111 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndufb11O09111 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ndufb11O09111 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndufb11O09111 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndufb11O09111 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndufb11O09111 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndufb11O09111 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ndufb11O09111 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ndufb11O09111 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.68■□□□□ 0.74
Ndufb11O09111 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndufb11O09111 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndufb11O09111 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Ndufb11O09111 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndufb11O09111 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ndufb11O09111 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ndufb11O09111 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ndufb11O09111 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ndufb11O09111 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ndufb11O09111 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ndufb11O09111 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ndufb11O09111 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndufb11O09111 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ndufb11O09111 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndufb11O09111 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.63■□□□□ 0.73
Ndufb11O09111 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndufb11O09111 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndufb11O09111 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ndufb11O09111 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ndufb11O09111 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ndufb11O09111 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ndufb11O09111 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ndufb11O09111 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ndufb11O09111 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ndufb11O09111 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ndufb11O09111 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ndufb11O09111 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.58■□□□□ 0.73
Ndufb11O09111 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Ndufb11O09111 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ndufb11O09111 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ndufb11O09111 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ndufb11O09111 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ndufb11O09111 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.57■□□□□ 0.72
Ndufb11O09111 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.57■□□□□ 0.72
Ndufb11O09111 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ndufb11O09111 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ndufb11O09111 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndufb11O09111 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndufb11O09111 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndufb11O09111 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndufb11O09111 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms