Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Tnfrsf11bO08712 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Tnfrsf11bO08712 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tnfrsf11bO08712 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tnfrsf11bO08712 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tnfrsf11bO08712 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Tnfrsf11bO08712 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tnfrsf11bO08712 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Tnfrsf11bO08712 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Tnfrsf11bO08712 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Tnfrsf11bO08712 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.18■■□□□ 1.62
Tnfrsf11bO08712 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Tnfrsf11bO08712 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Tnfrsf11bO08712 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.17■■□□□ 1.62
Tnfrsf11bO08712 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Tnfrsf11bO08712 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Tnfrsf11bO08712 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.16■■□□□ 1.62
Tnfrsf11bO08712 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Tnfrsf11bO08712 Gm16148-201ENSMUST00000119653 893 ntBASIC25.16■■□□□ 1.62
Tnfrsf11bO08712 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tnfrsf11bO08712 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Tnfrsf11bO08712 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Tnfrsf11bO08712 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Tnfrsf11bO08712 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Tnfrsf11bO08712 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.14■■□□□ 1.61
Tnfrsf11bO08712 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
Tnfrsf11bO08712 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Tnfrsf11bO08712 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tnfrsf11bO08712 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.1■■□□□ 1.61
Tnfrsf11bO08712 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tnfrsf11bO08712 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tnfrsf11bO08712 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tnfrsf11bO08712 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tnfrsf11bO08712 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.09■■□□□ 1.61
Tnfrsf11bO08712 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tnfrsf11bO08712 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.08■■□□□ 1.61
Tnfrsf11bO08712 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Tnfrsf11bO08712 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Tnfrsf11bO08712 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Tnfrsf11bO08712 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tnfrsf11bO08712 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Tnfrsf11bO08712 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.03■■□□□ 1.6
Tnfrsf11bO08712 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tnfrsf11bO08712 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tnfrsf11bO08712 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Tnfrsf11bO08712 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Tnfrsf11bO08712 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Tnfrsf11bO08712 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Tnfrsf11bO08712 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.01■■□□□ 1.59
Tnfrsf11bO08712 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Tnfrsf11bO08712 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Tnfrsf11bO08712 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Tnfrsf11bO08712 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Tnfrsf11bO08712 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Tnfrsf11bO08712 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Tnfrsf11bO08712 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Tnfrsf11bO08712 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
Tnfrsf11bO08712 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Tnfrsf11bO08712 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Tnfrsf11bO08712 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Tnfrsf11bO08712 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tnfrsf11bO08712 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tnfrsf11bO08712 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Tnfrsf11bO08712 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Tnfrsf11bO08712 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Tnfrsf11bO08712 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.93■■□□□ 1.58
Tnfrsf11bO08712 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Tnfrsf11bO08712 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Tnfrsf11bO08712 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Tnfrsf11bO08712 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Tnfrsf11bO08712 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Tnfrsf11bO08712 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Tnfrsf11bO08712 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Tnfrsf11bO08712 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Tnfrsf11bO08712 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Tnfrsf11bO08712 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tnfrsf11bO08712 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tnfrsf11bO08712 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Tnfrsf11bO08712 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Tnfrsf11bO08712 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tnfrsf11bO08712 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tnfrsf11bO08712 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Tnfrsf11bO08712 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
Tnfrsf11bO08712 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.84■■□□□ 1.57
Tnfrsf11bO08712 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tnfrsf11bO08712 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tnfrsf11bO08712 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Tnfrsf11bO08712 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Tnfrsf11bO08712 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tnfrsf11bO08712 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tnfrsf11bO08712 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Tnfrsf11bO08712 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.82■■□□□ 1.56
Tnfrsf11bO08712 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Tnfrsf11bO08712 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tnfrsf11bO08712 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Tnfrsf11bO08712 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tnfrsf11bO08712 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Tnfrsf11bO08712 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Tnfrsf11bO08712 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.76■■□□□ 1.55
Tnfrsf11bO08712 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms