Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx6-2D3Z4R4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx6-2D3Z4R4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nkx6-2D3Z4R4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx6-2D3Z4R4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nkx6-2D3Z4R4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx6-2D3Z4R4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.01■□□□□ 0.79
Nkx6-2D3Z4R4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Nkx6-2D3Z4R4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-2D3Z4R4 Gm17641-201ENSMUST00000166328 2350 ntBASIC20■□□□□ 0.79
Nkx6-2D3Z4R4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Nkx6-2D3Z4R4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.98■□□□□ 0.79
Nkx6-2D3Z4R4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx6-2D3Z4R4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx6-2D3Z4R4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx6-2D3Z4R4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx6-2D3Z4R4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx6-2D3Z4R4 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.97■□□□□ 0.79
Nkx6-2D3Z4R4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nkx6-2D3Z4R4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx6-2D3Z4R4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx6-2D3Z4R4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx6-2D3Z4R4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx6-2D3Z4R4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx6-2D3Z4R4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx6-2D3Z4R4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx6-2D3Z4R4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx6-2D3Z4R4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx6-2D3Z4R4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx6-2D3Z4R4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Nkx6-2D3Z4R4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx6-2D3Z4R4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx6-2D3Z4R4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nkx6-2D3Z4R4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.9■□□□□ 0.78
Nkx6-2D3Z4R4 Gm27325-201ENSMUST00000175467 74 ntBASIC19.9■□□□□ 0.78
Nkx6-2D3Z4R4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx6-2D3Z4R4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-2D3Z4R4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx6-2D3Z4R4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Nkx6-2D3Z4R4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Nkx6-2D3Z4R4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx6-2D3Z4R4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx6-2D3Z4R4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nkx6-2D3Z4R4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx6-2D3Z4R4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.84■□□□□ 0.77
Nkx6-2D3Z4R4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx6-2D3Z4R4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx6-2D3Z4R4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx6-2D3Z4R4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nkx6-2D3Z4R4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-2D3Z4R4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-2D3Z4R4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-2D3Z4R4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.81■□□□□ 0.76
Nkx6-2D3Z4R4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx6-2D3Z4R4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx6-2D3Z4R4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Nkx6-2D3Z4R4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-2D3Z4R4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-2D3Z4R4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-2D3Z4R4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Nkx6-2D3Z4R4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-2D3Z4R4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-2D3Z4R4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.78■□□□□ 0.76
Nkx6-2D3Z4R4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-2D3Z4R4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx6-2D3Z4R4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx6-2D3Z4R4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx6-2D3Z4R4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Nkx6-2D3Z4R4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx6-2D3Z4R4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.76■□□□□ 0.75
Nkx6-2D3Z4R4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx6-2D3Z4R4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx6-2D3Z4R4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx6-2D3Z4R4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-2D3Z4R4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Nkx6-2D3Z4R4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Nkx6-2D3Z4R4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-2D3Z4R4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-2D3Z4R4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-2D3Z4R4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-2D3Z4R4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nkx6-2D3Z4R4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx6-2D3Z4R4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx6-2D3Z4R4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms