Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Trav13n-4A0A0G2JG01 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav13n-4A0A0G2JG01 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav13n-4A0A0G2JG01 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav13n-4A0A0G2JG01 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav13n-4A0A0G2JG01 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.8■□□□□ 0.76
Trav13n-4A0A0G2JG01 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trav13n-4A0A0G2JG01 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.79■□□□□ 0.76
Trav13n-4A0A0G2JG01 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav13n-4A0A0G2JG01 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav13n-4A0A0G2JG01 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.77■□□□□ 0.76
Trav13n-4A0A0G2JG01 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trav13n-4A0A0G2JG01 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13n-4A0A0G2JG01 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav13n-4A0A0G2JG01 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Trav13n-4A0A0G2JG01 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trav13n-4A0A0G2JG01 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav13n-4A0A0G2JG01 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav13n-4A0A0G2JG01 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trav13n-4A0A0G2JG01 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.74■□□□□ 0.75
Trav13n-4A0A0G2JG01 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav13n-4A0A0G2JG01 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav13n-4A0A0G2JG01 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13n-4A0A0G2JG01 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.72■□□□□ 0.75
Trav13n-4A0A0G2JG01 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13n-4A0A0G2JG01 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav13n-4A0A0G2JG01 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13n-4A0A0G2JG01 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav13n-4A0A0G2JG01 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav13n-4A0A0G2JG01 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13n-4A0A0G2JG01 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.7■□□□□ 0.74
Trav13n-4A0A0G2JG01 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13n-4A0A0G2JG01 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13n-4A0A0G2JG01 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13n-4A0A0G2JG01 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trav13n-4A0A0G2JG01 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav13n-4A0A0G2JG01 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav13n-4A0A0G2JG01 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Trav13n-4A0A0G2JG01 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav13n-4A0A0G2JG01 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trav13n-4A0A0G2JG01 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.67■□□□□ 0.74
Trav13n-4A0A0G2JG01 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav13n-4A0A0G2JG01 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trav13n-4A0A0G2JG01 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav13n-4A0A0G2JG01 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav13n-4A0A0G2JG01 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav13n-4A0A0G2JG01 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trav13n-4A0A0G2JG01 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.65■□□□□ 0.74
Trav13n-4A0A0G2JG01 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Trav13n-4A0A0G2JG01 Gm24970-201ENSMUST00000175582 82 ntBASIC19.64■□□□□ 0.73
Trav13n-4A0A0G2JG01 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.64■□□□□ 0.73
Trav13n-4A0A0G2JG01 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trav13n-4A0A0G2JG01 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Trav13n-4A0A0G2JG01 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trav13n-4A0A0G2JG01 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav13n-4A0A0G2JG01 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.64■□□□□ 0.73
Trav13n-4A0A0G2JG01 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav13n-4A0A0G2JG01 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav13n-4A0A0G2JG01 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.63■□□□□ 0.73
Trav13n-4A0A0G2JG01 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav13n-4A0A0G2JG01 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav13n-4A0A0G2JG01 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav13n-4A0A0G2JG01 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.62■□□□□ 0.73
Trav13n-4A0A0G2JG01 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav13n-4A0A0G2JG01 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav13n-4A0A0G2JG01 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav13n-4A0A0G2JG01 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Trav13n-4A0A0G2JG01 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav13n-4A0A0G2JG01 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.6■□□□□ 0.73
Trav13n-4A0A0G2JG01 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav13n-4A0A0G2JG01 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav13n-4A0A0G2JG01 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trav13n-4A0A0G2JG01 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav13n-4A0A0G2JG01 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Trav13n-4A0A0G2JG01 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trav13n-4A0A0G2JG01 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav13n-4A0A0G2JG01 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav13n-4A0A0G2JG01 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav13n-4A0A0G2JG01 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav13n-4A0A0G2JG01 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13n-4A0A0G2JG01 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13n-4A0A0G2JG01 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13n-4A0A0G2JG01 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.56■□□□□ 0.72
Trav13n-4A0A0G2JG01 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav13n-4A0A0G2JG01 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav13n-4A0A0G2JG01 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav13n-4A0A0G2JG01 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav13n-4A0A0G2JG01 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trav13n-4A0A0G2JG01 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.54■□□□□ 0.72
Trav13n-4A0A0G2JG01 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.54■□□□□ 0.72
Trav13n-4A0A0G2JG01 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav13n-4A0A0G2JG01 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.53■□□□□ 0.72
Trav13n-4A0A0G2JG01 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav13n-4A0A0G2JG01 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav13n-4A0A0G2JG01 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav13n-4A0A0G2JG01 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav13n-4A0A0G2JG01 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.52■□□□□ 0.72
Trav13n-4A0A0G2JG01 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav13n-4A0A0G2JG01 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav13n-4A0A0G2JG01 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms