Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdh7A0A0A6YY83 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.81■■□□□ 1.72
Pcdh7A0A0A6YY83 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdh7A0A0A6YY83 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdh7A0A0A6YY83 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdh7A0A0A6YY83 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdh7A0A0A6YY83 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdh7A0A0A6YY83 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.78■■□□□ 1.72
Pcdh7A0A0A6YY83 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.78■■□□□ 1.72
Pcdh7A0A0A6YY83 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.78■■□□□ 1.72
Pcdh7A0A0A6YY83 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdh7A0A0A6YY83 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdh7A0A0A6YY83 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdh7A0A0A6YY83 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdh7A0A0A6YY83 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Pcdh7A0A0A6YY83 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
Pcdh7A0A0A6YY83 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.73■■□□□ 1.71
Pcdh7A0A0A6YY83 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdh7A0A0A6YY83 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdh7A0A0A6YY83 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdh7A0A0A6YY83 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdh7A0A0A6YY83 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.71■■□□□ 1.71
Pcdh7A0A0A6YY83 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdh7A0A0A6YY83 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.71■■□□□ 1.71
Pcdh7A0A0A6YY83 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.7■■□□□ 1.7
Pcdh7A0A0A6YY83 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdh7A0A0A6YY83 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.66■■□□□ 1.7
Pcdh7A0A0A6YY83 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdh7A0A0A6YY83 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdh7A0A0A6YY83 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdh7A0A0A6YY83 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.64■■□□□ 1.7
Pcdh7A0A0A6YY83 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdh7A0A0A6YY83 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Pcdh7A0A0A6YY83 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.61■■□□□ 1.69
Pcdh7A0A0A6YY83 Gm9397-201ENSMUST00000200125 605 ntBASIC25.61■■□□□ 1.69
Pcdh7A0A0A6YY83 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdh7A0A0A6YY83 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
Pcdh7A0A0A6YY83 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.6■■□□□ 1.69
Pcdh7A0A0A6YY83 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdh7A0A0A6YY83 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.59■■□□□ 1.69
Pcdh7A0A0A6YY83 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdh7A0A0A6YY83 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdh7A0A0A6YY83 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.57■■□□□ 1.68
Pcdh7A0A0A6YY83 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
Pcdh7A0A0A6YY83 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdh7A0A0A6YY83 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdh7A0A0A6YY83 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdh7A0A0A6YY83 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdh7A0A0A6YY83 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdh7A0A0A6YY83 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdh7A0A0A6YY83 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.52■■□□□ 1.68
Pcdh7A0A0A6YY83 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.52■■□□□ 1.68
Pcdh7A0A0A6YY83 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.52■■□□□ 1.68
Pcdh7A0A0A6YY83 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdh7A0A0A6YY83 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdh7A0A0A6YY83 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.52■■□□□ 1.68
Pcdh7A0A0A6YY83 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdh7A0A0A6YY83 Gm24970-201ENSMUST00000175582 82 ntBASIC25.5■■□□□ 1.67
Pcdh7A0A0A6YY83 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.49■■□□□ 1.67
Pcdh7A0A0A6YY83 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdh7A0A0A6YY83 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Pcdh7A0A0A6YY83 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
Pcdh7A0A0A6YY83 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdh7A0A0A6YY83 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdh7A0A0A6YY83 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.46■■□□□ 1.67
Pcdh7A0A0A6YY83 Gm45855-201ENSMUST00000212546 880 ntBASIC25.46■■□□□ 1.67
Pcdh7A0A0A6YY83 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdh7A0A0A6YY83 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
Pcdh7A0A0A6YY83 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdh7A0A0A6YY83 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdh7A0A0A6YY83 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdh7A0A0A6YY83 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdh7A0A0A6YY83 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.43■■□□□ 1.66
Pcdh7A0A0A6YY83 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.43■■□□□ 1.66
Pcdh7A0A0A6YY83 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.43■■□□□ 1.66
Pcdh7A0A0A6YY83 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.43■■□□□ 1.66
Pcdh7A0A0A6YY83 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Pcdh7A0A0A6YY83 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdh7A0A0A6YY83 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdh7A0A0A6YY83 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdh7A0A0A6YY83 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.41■■□□□ 1.66
Pcdh7A0A0A6YY83 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdh7A0A0A6YY83 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdh7A0A0A6YY83 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdh7A0A0A6YY83 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdh7A0A0A6YY83 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdh7A0A0A6YY83 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdh7A0A0A6YY83 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.38■■□□□ 1.65
Pcdh7A0A0A6YY83 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.37■■□□□ 1.65
Pcdh7A0A0A6YY83 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh7A0A0A6YY83 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh7A0A0A6YY83 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh7A0A0A6YY83 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh7A0A0A6YY83 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh7A0A0A6YY83 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh7A0A0A6YY83 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdh7A0A0A6YY83 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdh7A0A0A6YY83 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdh7A0A0A6YY83 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdh7A0A0A6YY83 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms