Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav7-6A0A075B640 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav7-6A0A075B640 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-6A0A075B640 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-6A0A075B640 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-6A0A075B640 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-6A0A075B640 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-6A0A075B640 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-6A0A075B640 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-6A0A075B640 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-6A0A075B640 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav7-6A0A075B640 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav7-6A0A075B640 Amer2-203ENSMUST00000225247 2662 ntBASIC17.04■□□□□ 0.32
Trav7-6A0A075B640 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.04■□□□□ 0.32
Trav7-6A0A075B640 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7-6A0A075B640 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7-6A0A075B640 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav7-6A0A075B640 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7-6A0A075B640 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav7-6A0A075B640 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav7-6A0A075B640 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav7-6A0A075B640 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-6A0A075B640 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-6A0A075B640 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-6A0A075B640 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-6A0A075B640 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7-6A0A075B640 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav7-6A0A075B640 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav7-6A0A075B640 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7-6A0A075B640 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7-6A0A075B640 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Trav7-6A0A075B640 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7-6A0A075B640 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-6A0A075B640 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav7-6A0A075B640 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-6A0A075B640 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7-6A0A075B640 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7-6A0A075B640 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav7-6A0A075B640 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7-6A0A075B640 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7-6A0A075B640 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7-6A0A075B640 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7-6A0A075B640 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.96■□□□□ 0.31
Trav7-6A0A075B640 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav7-6A0A075B640 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav7-6A0A075B640 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.95■□□□□ 0.3
Trav7-6A0A075B640 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7-6A0A075B640 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7-6A0A075B640 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7-6A0A075B640 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav7-6A0A075B640 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav7-6A0A075B640 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav7-6A0A075B640 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav7-6A0A075B640 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7-6A0A075B640 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7-6A0A075B640 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav7-6A0A075B640 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7-6A0A075B640 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav7-6A0A075B640 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav7-6A0A075B640 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav7-6A0A075B640 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav7-6A0A075B640 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-6A0A075B640 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav7-6A0A075B640 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav7-6A0A075B640 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7-6A0A075B640 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7-6A0A075B640 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav7-6A0A075B640 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav7-6A0A075B640 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.89■□□□□ 0.29
Trav7-6A0A075B640 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav7-6A0A075B640 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav7-6A0A075B640 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav7-6A0A075B640 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav7-6A0A075B640 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav7-6A0A075B640 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav7-6A0A075B640 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav7-6A0A075B640 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7-6A0A075B640 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav7-6A0A075B640 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.86■□□□□ 0.29
Trav7-6A0A075B640 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav7-6A0A075B640 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav7-6A0A075B640 Gm24804-201ENSMUST00000174982 85 ntBASIC16.85■□□□□ 0.29
Trav7-6A0A075B640 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-6A0A075B640 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav7-6A0A075B640 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-6A0A075B640 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav7-6A0A075B640 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7-6A0A075B640 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7-6A0A075B640 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7-6A0A075B640 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav7-6A0A075B640 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Trav7-6A0A075B640 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7-6A0A075B640 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav7-6A0A075B640 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav7-6A0A075B640 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav7-6A0A075B640 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav7-6A0A075B640 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav7-6A0A075B640 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav7-6A0A075B640 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav7-6A0A075B640 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms