Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav16nA0A075B634 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trav16nA0A075B634 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav16nA0A075B634 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav16nA0A075B634 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.54■□□□□ 0.56
Trav16nA0A075B634 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.54■□□□□ 0.56
Trav16nA0A075B634 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav16nA0A075B634 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trav16nA0A075B634 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav16nA0A075B634 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav16nA0A075B634 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav16nA0A075B634 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav16nA0A075B634 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav16nA0A075B634 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Trav16nA0A075B634 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav16nA0A075B634 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav16nA0A075B634 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.5■□□□□ 0.55
Trav16nA0A075B634 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav16nA0A075B634 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav16nA0A075B634 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trav16nA0A075B634 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav16nA0A075B634 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav16nA0A075B634 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav16nA0A075B634 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav16nA0A075B634 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav16nA0A075B634 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav16nA0A075B634 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav16nA0A075B634 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav16nA0A075B634 Gm27322-201ENSMUST00000184007 104 ntBASIC18.45■□□□□ 0.54
Trav16nA0A075B634 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trav16nA0A075B634 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav16nA0A075B634 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav16nA0A075B634 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Trav16nA0A075B634 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav16nA0A075B634 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Trav16nA0A075B634 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav16nA0A075B634 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav16nA0A075B634 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav16nA0A075B634 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav16nA0A075B634 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav16nA0A075B634 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav16nA0A075B634 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
Trav16nA0A075B634 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav16nA0A075B634 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.39■□□□□ 0.53
Trav16nA0A075B634 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trav16nA0A075B634 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav16nA0A075B634 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav16nA0A075B634 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav16nA0A075B634 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav16nA0A075B634 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav16nA0A075B634 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav16nA0A075B634 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav16nA0A075B634 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav16nA0A075B634 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.37■□□□□ 0.53
Trav16nA0A075B634 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav16nA0A075B634 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.35■□□□□ 0.53
Trav16nA0A075B634 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trav16nA0A075B634 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Trav16nA0A075B634 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.35■□□□□ 0.53
Trav16nA0A075B634 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav16nA0A075B634 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav16nA0A075B634 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav16nA0A075B634 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav16nA0A075B634 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav16nA0A075B634 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav16nA0A075B634 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav16nA0A075B634 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trav16nA0A075B634 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav16nA0A075B634 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.34■□□□□ 0.53
Trav16nA0A075B634 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav16nA0A075B634 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav16nA0A075B634 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav16nA0A075B634 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav16nA0A075B634 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trav16nA0A075B634 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.32■□□□□ 0.52
Trav16nA0A075B634 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav16nA0A075B634 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trav16nA0A075B634 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav16nA0A075B634 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav16nA0A075B634 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav16nA0A075B634 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trav16nA0A075B634 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav16nA0A075B634 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav16nA0A075B634 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav16nA0A075B634 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav16nA0A075B634 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Trav16nA0A075B634 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Trav16nA0A075B634 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav16nA0A075B634 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav16nA0A075B634 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav16nA0A075B634 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav16nA0A075B634 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav16nA0A075B634 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trav16nA0A075B634 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav16nA0A075B634 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav16nA0A075B634 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav16nA0A075B634 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav16nA0A075B634 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav16nA0A075B634 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav16nA0A075B634 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms