Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19,16■□□□□ 0,66
Trav6n-5A0A075B621 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19,16■□□□□ 0,66
Trav6n-5A0A075B621 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19,15■□□□□ 0,66
Trav6n-5A0A075B621 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19,14■□□□□ 0,65
Trav6n-5A0A075B621 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19,14■□□□□ 0,65
Trav6n-5A0A075B621 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19,13■□□□□ 0,65
Trav6n-5A0A075B621 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19,13■□□□□ 0,65
Trav6n-5A0A075B621 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19,13■□□□□ 0,65
Trav6n-5A0A075B621 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19,12■□□□□ 0,65
Trav6n-5A0A075B621 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19,12■□□□□ 0,65
Trav6n-5A0A075B621 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19,12■□□□□ 0,65
Trav6n-5A0A075B621 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19,12■□□□□ 0,65
Trav6n-5A0A075B621 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19,11■□□□□ 0,65
Trav6n-5A0A075B621 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19,1■□□□□ 0,65
Trav6n-5A0A075B621 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19,1■□□□□ 0,65
Trav6n-5A0A075B621 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19,09■□□□□ 0,65
Trav6n-5A0A075B621 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19,09■□□□□ 0,65
Trav6n-5A0A075B621 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19,09■□□□□ 0,65
Trav6n-5A0A075B621 Gm30346-201ENSMUST00000218641 1699 ntBASIC19,08■□□□□ 0,65
Trav6n-5A0A075B621 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,65
Trav6n-5A0A075B621 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,64
Trav6n-5A0A075B621 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19,07■□□□□ 0,64
Trav6n-5A0A075B621 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19,07■□□□□ 0,64
Trav6n-5A0A075B621 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19,07■□□□□ 0,64
Trav6n-5A0A075B621 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Trav6n-5A0A075B621 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19,06■□□□□ 0,64
Trav6n-5A0A075B621 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19,06■□□□□ 0,64
Trav6n-5A0A075B621 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Trav6n-5A0A075B621 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Trav6n-5A0A075B621 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Trav6n-5A0A075B621 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19,06■□□□□ 0,64
Trav6n-5A0A075B621 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Trav6n-5A0A075B621 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19,06■□□□□ 0,64
Trav6n-5A0A075B621 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19,05■□□□□ 0,64
Trav6n-5A0A075B621 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19,05■□□□□ 0,64
Trav6n-5A0A075B621 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19,04■□□□□ 0,64
Trav6n-5A0A075B621 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19,04■□□□□ 0,64
Trav6n-5A0A075B621 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19,04■□□□□ 0,64
Trav6n-5A0A075B621 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19,01■□□□□ 0,63
Trav6n-5A0A075B621 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19■□□□□ 0,63
Trav6n-5A0A075B621 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0,63
Trav6n-5A0A075B621 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0,63
Trav6n-5A0A075B621 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18,99■□□□□ 0,63
Trav6n-5A0A075B621 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18,99■□□□□ 0,63
Trav6n-5A0A075B621 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18,99■□□□□ 0,63
Trav6n-5A0A075B621 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18,99■□□□□ 0,63
Trav6n-5A0A075B621 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18,99■□□□□ 0,63
Trav6n-5A0A075B621 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18,99■□□□□ 0,63
Trav6n-5A0A075B621 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18,99■□□□□ 0,63
Trav6n-5A0A075B621 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18,98■□□□□ 0,63
Trav6n-5A0A075B621 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18,98■□□□□ 0,63
Trav6n-5A0A075B621 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18,97■□□□□ 0,63
Trav6n-5A0A075B621 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18,97■□□□□ 0,63
Trav6n-5A0A075B621 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18,97■□□□□ 0,63
Trav6n-5A0A075B621 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18,97■□□□□ 0,63
Trav6n-5A0A075B621 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18,96■□□□□ 0,63
Trav6n-5A0A075B621 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18,96■□□□□ 0,63
Trav6n-5A0A075B621 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18,95■□□□□ 0,62
Trav6n-5A0A075B621 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18,94■□□□□ 0,62
Trav6n-5A0A075B621 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18,94■□□□□ 0,62
Trav6n-5A0A075B621 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18,94■□□□□ 0,62
Trav6n-5A0A075B621 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18,94■□□□□ 0,62
Trav6n-5A0A075B621 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18,93■□□□□ 0,62
Trav6n-5A0A075B621 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18,93■□□□□ 0,62
Trav6n-5A0A075B621 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18,91■□□□□ 0,62
Trav6n-5A0A075B621 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18,91■□□□□ 0,62
Trav6n-5A0A075B621 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18,91■□□□□ 0,62
Trav6n-5A0A075B621 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18,91■□□□□ 0,62
Trav6n-5A0A075B621 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18,91■□□□□ 0,62
Trav6n-5A0A075B621 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18,91■□□□□ 0,62
Trav6n-5A0A075B621 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18,91■□□□□ 0,62
Trav6n-5A0A075B621 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18,9■□□□□ 0,62
Trav6n-5A0A075B621 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18,9■□□□□ 0,62
Trav6n-5A0A075B621 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18,89■□□□□ 0,61
Trav6n-5A0A075B621 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18,89■□□□□ 0,61
Trav6n-5A0A075B621 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18,89■□□□□ 0,61
Trav6n-5A0A075B621 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18,88■□□□□ 0,61
Trav6n-5A0A075B621 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18,88■□□□□ 0,61
Trav6n-5A0A075B621 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18,88■□□□□ 0,61
Trav6n-5A0A075B621 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18,87■□□□□ 0,61
Trav6n-5A0A075B621 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18,87■□□□□ 0,61
Trav6n-5A0A075B621 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18,86■□□□□ 0,61
Trav6n-5A0A075B621 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18,86■□□□□ 0,61
Trav6n-5A0A075B621 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18,85■□□□□ 0,61
Trav6n-5A0A075B621 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18,85■□□□□ 0,61
Trav6n-5A0A075B621 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18,84■□□□□ 0,61
Trav6n-5A0A075B621 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18,83■□□□□ 0,61
Trav6n-5A0A075B621 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18,82■□□□□ 0,6
Trav6n-5A0A075B621 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18,82■□□□□ 0,6
Trav6n-5A0A075B621 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18,82■□□□□ 0,6
Trav6n-5A0A075B621 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18,81■□□□□ 0,6
Trav6n-5A0A075B621 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18,81■□□□□ 0,6
Trav6n-5A0A075B621 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18,8■□□□□ 0,6
Trav6n-5A0A075B621 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18,8■□□□□ 0,6
Trav6n-5A0A075B621 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18,8■□□□□ 0,6
Trav6n-5A0A075B621 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18,8■□□□□ 0,6
Trav6n-5A0A075B621 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18,8■□□□□ 0,6
Trav6n-5A0A075B621 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18,8■□□□□ 0,6
Trav6n-5A0A075B621 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18,8■□□□□ 0,6
Trav6n-5A0A075B621 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18,79■□□□□ 0,6
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms