Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Mir7033-201ENSMUST00000184259 81 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm42708-201ENSMUST00000196332 905 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm1969-201ENSMUST00000198125 1220 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm44374-201ENSMUST00000199821 140 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm44681-201ENSMUST00000208447 842 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 AC131654.1-201ENSMUST00000219675 745 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm46231-201ENSMUST00000220152 314 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 AC158536.1-201ENSMUST00000222510 256 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm18631-201ENSMUST00000223125 1043 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 AC124397.1-201ENSMUST00000224296 653 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm26203-201ENSMUST00000082911 114 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 n-R5s169-201ENSMUST00000083110 120 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm2108-201ENSMUST00000165058 2177 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm7416-201ENSMUST00000117448 1487 ntBASIC9.27□□□□□ -0.93
RtcbQ99LF4 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
RtcbQ99LF4 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 AC153955.4-201ENSMUST00000217069 2752 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm16221-201ENSMUST00000117331 393 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm13702-201ENSMUST00000118542 825 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm8722-201ENSMUST00000121466 769 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm8609-201ENSMUST00000182967 998 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm9423-201ENSMUST00000183173 997 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm43048-201ENSMUST00000196101 388 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 AC155270.1-202ENSMUST00000221503 352 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 AC114008.1-201ENSMUST00000226193 937 ntBASIC9.26□□□□□ -0.93
RtcbQ99LF4 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RtcbQ99LF4 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
RtcbQ99LF4 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RtcbQ99LF4 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RtcbQ99LF4 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC9.25□□□□□ -0.93
RtcbQ99LF4 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RtcbQ99LF4 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
RtcbQ99LF4 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RtcbQ99LF4 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms