Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm26959-201ENSMUST00000182376 978 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm27684-201ENSMUST00000183778 80 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm29354-201ENSMUST00000187613 696 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm45610-201ENSMUST00000209227 784 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 CT009515.1-201ENSMUST00000228127 586 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Brf1Q8CFK2 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.62□□□□□ -1.03
Brf1Q8CFK2 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 AC140393.3-201ENSMUST00000228396 1352 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Gm25546-201ENSMUST00000103977 132 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Gm23437-201ENSMUST00000104036 127 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Gm15739-201ENSMUST00000118049 872 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Gm26179-201ENSMUST00000177723 132 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Mir378d-201ENSMUST00000184232 110 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 AC187103.4-201ENSMUST00000225399 300 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 AC154838.2-201ENSMUST00000226602 747 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Grik1-209ENSMUST00000227986 2942 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Brf1Q8CFK2 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.61□□□□□ -1.03
Brf1Q8CFK2 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm25843-201ENSMUST00000122582 314 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm22025-201ENSMUST00000122734 302 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm7420-201ENSMUST00000162836 842 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm21182-201ENSMUST00000178899 794 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm37328-201ENSMUST00000193191 640 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm37349-201ENSMUST00000194205 624 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm38217-201ENSMUST00000194358 910 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm8539-201ENSMUST00000199822 501 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm43926-201ENSMUST00000203978 430 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Brf1Q8CFK2 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms