Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm21241-201ENSMUST00000179551 934 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm7191-201ENSMUST00000182678 990 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm6750-201ENSMUST00000189273 268 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm4859-201ENSMUST00000199625 787 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm45712-201ENSMUST00000212417 335 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 CT030182.3-201ENSMUST00000225986 582 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm24150-201ENSMUST00000082759 104 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm17229-202ENSMUST00000166792 1753 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm43544-201ENSMUST00000196474 2472 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Kctd21-201ENSMUST00000054107 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Gm18508-201ENSMUST00000215790 1642 ntBASIC8.91□□□□□ -0.98
Trim47Q8C0E3 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm42981-201ENSMUST00000200184 3252 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm43080-201ENSMUST00000199006 2643 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm9776-201ENSMUST00000059598 2980 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm20775-201ENSMUST00000100115 1851 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm42656-201ENSMUST00000201506 2305 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm24472-201ENSMUST00000104484 132 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm7206-201ENSMUST00000117730 508 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm7831-201ENSMUST00000117990 552 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm14519-201ENSMUST00000118490 312 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm15923-201ENSMUST00000119300 1169 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm12993-201ENSMUST00000119900 479 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm13080-201ENSMUST00000120556 420 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm12477-201ENSMUST00000121221 571 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm13440-201ENSMUST00000121665 496 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm14328-201ENSMUST00000122178 408 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm26000-201ENSMUST00000157991 107 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm26933-201ENSMUST00000182320 827 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm27864-201ENSMUST00000183704 190 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Mir7230-201ENSMUST00000195977 56 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm43694-201ENSMUST00000200773 1119 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm4874-201ENSMUST00000203589 691 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm5654-201ENSMUST00000217787 475 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 AC154450.1-201ENSMUST00000220911 485 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 AC131085.1-201ENSMUST00000224746 656 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 AC118639.1-204ENSMUST00000226401 694 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Gm10805-201ENSMUST00000099710 399 ntBASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim47Q8C0E3 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim47Q8C0E3 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trim47Q8C0E3 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim47Q8C0E3 Gm43790-201ENSMUST00000202694 2013 ntBASIC8.9□□□□□ -0.99
Trim47Q8C0E3 AC131743.4-201ENSMUST00000221638 1553 ntBASIC8.9□□□□□ -0.99
Trim47Q8C0E3 AC122346.2-201ENSMUST00000224326 2931 ntBASIC8.9□□□□□ -0.99
Trim47Q8C0E3 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC8.9□□□□□ -0.99
Trim47Q8C0E3 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim47Q8C0E3 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms