Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC9.4□□□□□ -0.9
Col18a1P39061 Gm25550-201ENSMUST00000158079 128 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC9.4□□□□□ -0.9
Col18a1P39061 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Gm29470-201ENSMUST00000188007 696 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Gm28455-201ENSMUST00000189105 1290 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Gm45432-201ENSMUST00000210391 416 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Gm19212-201ENSMUST00000216642 862 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 AC154270.2-201ENSMUST00000226755 2306 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Gm4806-201ENSMUST00000222704 1690 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 AC121286.2-201ENSMUST00000218069 2470 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Gm2223-201ENSMUST00000112099 1350 ntBASIC9.4□□□□□ -0.9
Col18a1P39061 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col18a1P39061 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC9.4□□□□□ -0.91
Col18a1P39061 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col18a1P39061 Gm43410-201ENSMUST00000197510 2234 ntBASIC9.4□□□□□ -0.91
Col18a1P39061 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
Col18a1P39061 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col18a1P39061 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col18a1P39061 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Col18a1P39061 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Col18a1P39061 Gm13400-201ENSMUST00000117436 380 ntBASIC9.4□□□□□ -0.91
Col18a1P39061 Gm6918-201ENSMUST00000167622 1222 ntBASIC9.4□□□□□ -0.91
Col18a1P39061 Gm4956-202ENSMUST00000178869 672 ntBASIC9.4□□□□□ -0.91
Col18a1P39061 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Col18a1P39061 Gm37475-201ENSMUST00000193107 1015 ntBASIC9.4□□□□□ -0.91
Col18a1P39061 Gm18430-201ENSMUST00000197534 682 ntBASIC9.4□□□□□ -0.91
Col18a1P39061 Gm42516-201ENSMUST00000198691 767 ntBASIC9.4□□□□□ -0.91
Col18a1P39061 Gm9269-201ENSMUST00000221661 578 ntBASIC9.4□□□□□ -0.91
Col18a1P39061 Gm2139-201ENSMUST00000222569 1075 ntBASIC9.4□□□□□ -0.91
Col18a1P39061 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Col18a1P39061 Gm25515-201ENSMUST00000083858 157 ntBASIC9.4□□□□□ -0.91
Col18a1P39061 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC9.39□□□□□ -0.91
Col18a1P39061 AC171003.1-201ENSMUST00000221667 1665 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 B930095G15Rik-201ENSMUST00000130256 4715 ntTSL 2 BASIC9.39□□□□□ -0.91
Col18a1P39061 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Col18a1P39061 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm10862-201ENSMUST00000193956 3350 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm37496-201ENSMUST00000191930 2509 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm44669-201ENSMUST00000207774 1969 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.39□□□□□ -0.91
Col18a1P39061 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Col18a1P39061 Smcr8-202ENSMUST00000102667 3544 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm25178-201ENSMUST00000122633 325 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm23539-201ENSMUST00000157537 224 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Gm23030-201ENSMUST00000158004 273 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Gm17217-201ENSMUST00000166613 469 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm28766-201ENSMUST00000191086 234 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Gm44353-201ENSMUST00000200618 138 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 AC155941.1-201ENSMUST00000220223 529 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC9.39□□□□□ -0.91
Col18a1P39061 Synj2-207ENSMUST00000115788 3498 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 AC158388.2-201ENSMUST00000223665 1314 ntBASIC9.39□□□□□ -0.91
Col18a1P39061 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Col18a1P39061 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC9.39□□□□□ -0.91
Col18a1P39061 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Col18a1P39061 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC9.38□□□□□ -0.91
Col18a1P39061 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Gm14659-201ENSMUST00000117667 843 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm11976-201ENSMUST00000119236 295 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm13462-201ENSMUST00000121472 961 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm24065-201ENSMUST00000157487 264 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Col18a1P39061 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm9167-201ENSMUST00000182469 962 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC9.38□□□□□ -0.91
Col18a1P39061 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC9.38□□□□□ -0.91
Col18a1P39061 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC9.38□□□□□ -0.91
Col18a1P39061 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms