Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm23834-201ENSMUST00000104436 129 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm24257-201ENSMUST00000104472 131 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Cdx1P18111 Gm13400-201ENSMUST00000117436 380 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm11997-201ENSMUST00000118697 313 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Gm10157-201ENSMUST00000139408 343 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdx1P18111 Mir7058-201ENSMUST00000184637 75 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm18033-201ENSMUST00000186678 550 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm28193-201ENSMUST00000189863 615 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC5.89□□□□□ -1.47
Cdx1P18111 Gm8407-201ENSMUST00000192719 427 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Gm38051-201ENSMUST00000193740 433 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm43815-201ENSMUST00000197676 990 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Klra13-ps-203ENSMUST00000204367 850 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Gm45283-201ENSMUST00000210593 628 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdx1P18111 Gm6885-201ENSMUST00000217261 372 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC5.89□□□□□ -1.47
Cdx1P18111 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 AC125019.1-201ENSMUST00000224809 908 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 AC124715.2-201ENSMUST00000226762 617 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 AC122397.3-201ENSMUST00000227097 527 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 AC147096.1-201ENSMUST00000227648 352 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Cdx1P18111 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdx1P18111 Gm19801-201ENSMUST00000218231 1882 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Cdx1P18111 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdx1P18111 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Cdx1P18111 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Gm38302-201ENSMUST00000191676 2076 ntBASIC5.89□□□□□ -1.47
Cdx1P18111 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdx1P18111 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdx1P18111 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdx1P18111 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm12306-201ENSMUST00000117256 171 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Gm14158-201ENSMUST00000118409 308 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Gm4911-201ENSMUST00000119388 945 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Gm12844-201ENSMUST00000119463 582 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Gm12630-201ENSMUST00000121575 784 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdx1P18111 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm26408-201ENSMUST00000157672 127 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdx1P18111 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm28341-201ENSMUST00000190883 472 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm43108-201ENSMUST00000200525 293 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Gm44380-201ENSMUST00000203125 293 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdx1P18111 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdx1P18111 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC5.88□□□□□ -1.47
Cdx1P18111 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 AC122360.1-201ENSMUST00000217737 624 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 AC132304.1-201ENSMUST00000218860 135 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC5.88□□□□□ -1.47
Cdx1P18111 AC154806.1-202ENSMUST00000227949 885 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 AC114585.2-203ENSMUST00000228400 339 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdx1P18111 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdx1P18111 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdx1P18111 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.88□□□□□ -1.47
Cdx1P18111 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms