Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28943-201ENSMUST00000186187 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28736-201ENSMUST00000186257 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm29401-201ENSMUST00000186690 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm29178-204ENSMUST00000186784 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28589-201ENSMUST00000186991 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28936-201ENSMUST00000187153 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm29121-201ENSMUST00000187611 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28243-201ENSMUST00000187801 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28844-202ENSMUST00000187977 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm29058-201ENSMUST00000189510 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm29624-201ENSMUST00000190018 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28780-201ENSMUST00000190223 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28969-211ENSMUST00000190992 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm28990-207ENSMUST00000191219 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm35323-201ENSMUST00000191836 499 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm36468-201ENSMUST00000192119 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm31572-201ENSMUST00000193341 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm30175-201ENSMUST00000194173 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Gm30858-201ENSMUST00000195516 615 ntBASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
Col6a3E9PWQ3 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm37536-201ENSMUST00000194710 2491 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Il6st-203ENSMUST00000183663 8678 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm26422-201ENSMUST00000104276 132 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm25534-201ENSMUST00000175365 125 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm42514-201ENSMUST00000196636 1832 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm13878-201ENSMUST00000117986 577 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm13940-201ENSMUST00000121023 301 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Gm6863-201ENSMUST00000052882 636 ntBASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 G730013B05Rik-201ENSMUST00000180509 2176 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Col6a3E9PWQ3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm43980-201ENSMUST00000204899 1612 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm9286-201ENSMUST00000173586 508 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm26784-201ENSMUST00000181666 410 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm17999-201ENSMUST00000211568 542 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms