Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.4□□□□□ -1.38
Scrt1Q99M85 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Scrt1Q99M85 Gm22504-201ENSMUST00000082963 139 ntBASIC6.4□□□□□ -1.38
Scrt1Q99M85 Gm29486-201ENSMUST00000088648 372 ntBASIC6.4□□□□□ -1.38
Scrt1Q99M85 Gm5446-201ENSMUST00000091762 784 ntBASIC6.4□□□□□ -1.38
Scrt1Q99M85 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.4□□□□□ -1.39
Scrt1Q99M85 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Scrt1Q99M85 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Scrt1Q99M85 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm13423-201ENSMUST00000117205 888 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm8662-201ENSMUST00000118644 574 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm7494-201ENSMUST00000121248 441 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm24781-201ENSMUST00000157636 117 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm28983-201ENSMUST00000186685 614 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm28150-201ENSMUST00000187305 614 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm28377-201ENSMUST00000189695 720 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm42708-201ENSMUST00000196332 905 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm45394-201ENSMUST00000209240 1175 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm7351-201ENSMUST00000210745 580 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm5791-201ENSMUST00000220840 489 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm38359-201ENSMUST00000191884 2225 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.39□□□□□ -1.39
Scrt1Q99M85 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Scrt1Q99M85 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm12959-201ENSMUST00000119396 403 ntBASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm11370-201ENSMUST00000120583 260 ntBASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm11474-201ENSMUST00000120814 277 ntBASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm23533-201ENSMUST00000157540 245 ntBASIC6.38□□□□□ -1.39
Scrt1Q99M85 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.38□□□□□ -1.39
Scrt1Q99M85 Gm5445-201ENSMUST00000180224 480 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 263.9 ms