Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Vps53Q8CCB4 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.49□□□□□ -1.05
Vps53Q8CCB4 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Dcdc5-202ENSMUST00000122388 4957 ntBASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm23323-201ENSMUST00000104471 133 ntBASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm28164-201ENSMUST00000190143 442 ntBASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC8.49□□□□□ -1.05
Vps53Q8CCB4 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm13444-201ENSMUST00000119445 522 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm13735-201ENSMUST00000120217 670 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm25989-201ENSMUST00000158761 133 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm7436-201ENSMUST00000187229 391 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Ighv1-29-201ENSMUST00000194116 342 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm45394-201ENSMUST00000209240 1175 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Vps53Q8CCB4 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Vps53Q8CCB4 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms