Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.9□□□□□ -0.83
Usp40Q8BWR4 Gm6866-201ENSMUST00000188559 2549 ntBASIC9.9□□□□□ -0.83
Usp40Q8BWR4 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Usp40Q8BWR4 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Usp40Q8BWR4 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Usp40Q8BWR4 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Usp40Q8BWR4 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm37984-201ENSMUST00000191641 3733 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm37499-201ENSMUST00000194683 3478 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm38043-201ENSMUST00000195501 5141 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm14380-201ENSMUST00000122298 431 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm7426-201ENSMUST00000179046 404 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm29156-201ENSMUST00000187764 499 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm43316-201ENSMUST00000197252 1295 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm4870-201ENSMUST00000198525 1251 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 AC172027.1-201ENSMUST00000217659 337 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm19047-201ENSMUST00000220922 1099 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 AC153152.2-201ENSMUST00000223165 959 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 AC164294.1-201ENSMUST00000224682 688 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 AC159193.3-201ENSMUST00000221902 2622 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 CT025619.3-201ENSMUST00000216299 3267 ntBASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Usp40Q8BWR4 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gm18451-201ENSMUST00000196759 1719 ntBASIC9.88□□□□□ -0.83
Usp40Q8BWR4 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gm2178-201ENSMUST00000104927 357 ntBASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gm28117-201ENSMUST00000188472 371 ntBASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gm43222-201ENSMUST00000199013 603 ntBASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Gm44683-201ENSMUST00000209088 484 ntBASIC9.88□□□□□ -0.83
Usp40Q8BWR4 AC173345.3-201ENSMUST00000221245 1093 ntBASIC9.88□□□□□ -0.83
Usp40Q8BWR4 CT025525.2-201ENSMUST00000227743 423 ntBASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Usp40Q8BWR4 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms