Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm22025-201ENSMUST00000122734 302 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm28573-201ENSMUST00000187821 380 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm28145-201ENSMUST00000189742 380 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm28400-201ENSMUST00000191332 380 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm38022-201ENSMUST00000191762 403 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm43656-201ENSMUST00000197882 434 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm46311-201ENSMUST00000217971 203 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm4796-201ENSMUST00000219802 624 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 AC154646.1-201ENSMUST00000225011 1092 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp49Q6P9L4 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm26016-201ENSMUST00000104403 129 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm15074-201ENSMUST00000117603 936 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm13878-201ENSMUST00000117986 577 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm22035-201ENSMUST00000157284 228 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm23740-201ENSMUST00000157385 100 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm5283-201ENSMUST00000177874 334 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm37328-201ENSMUST00000193191 640 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm6581-201ENSMUST00000214545 260 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp49Q6P9L4 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp49Q6P9L4 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8□□□□□ -1.13
Usp49Q6P9L4 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Usp49Q6P9L4 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Usp49Q6P9L4 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Usp49Q6P9L4 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp49Q6P9L4 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp49Q6P9L4 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Usp49Q6P9L4 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
Usp49Q6P9L4 Gm17170-201ENSMUST00000112785 316 ntBASIC8□□□□□ -1.13
Usp49Q6P9L4 Gm13940-201ENSMUST00000121023 301 ntBASIC8□□□□□ -1.13
Usp49Q6P9L4 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp49Q6P9L4 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms