Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Nphp4P59240 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Nphp4P59240 Snord88a-201ENSMUST00000116723 90 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC9.68□□□□□ -0.86
Nphp4P59240 Gm15311-201ENSMUST00000119682 282 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 Gm15305-201ENSMUST00000120354 288 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 Gm5970-201ENSMUST00000131638 1216 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 Gm26353-201ENSMUST00000158224 255 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 Gm16298-201ENSMUST00000161107 420 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Gm21614-201ENSMUST00000183260 1005 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC9.68□□□□□ -0.86
Nphp4P59240 Gm8168-201ENSMUST00000209631 948 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 AC150661.1-201ENSMUST00000222563 495 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Nphp4P59240 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Gm43497-201ENSMUST00000201137 2316 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 CT025619.3-201ENSMUST00000216299 3267 ntBASIC9.68□□□□□ -0.86
Nphp4P59240 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Nphp4P59240 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Nphp4P59240 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Nphp4P59240 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nphp4P59240 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.67□□□□□ -0.86
Nphp4P59240 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Gm11501-201ENSMUST00000118039 581 ntBASIC9.67□□□□□ -0.86
Nphp4P59240 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC9.67□□□□□ -0.86
Nphp4P59240 Gm8550-201ENSMUST00000161621 653 ntBASIC9.67□□□□□ -0.86
Nphp4P59240 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Gm38068-201ENSMUST00000192546 540 ntBASIC9.67□□□□□ -0.86
Nphp4P59240 Gm7019-201ENSMUST00000194122 369 ntBASIC9.67□□□□□ -0.86
Nphp4P59240 Gm4751-201ENSMUST00000200620 1105 ntBASIC9.67□□□□□ -0.86
Nphp4P59240 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC9.67□□□□□ -0.86
Nphp4P59240 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 AL929555.1-201ENSMUST00000215283 509 ntBASIC9.67□□□□□ -0.86
Nphp4P59240 AC148328.2-201ENSMUST00000216960 262 ntBASIC9.67□□□□□ -0.86
Nphp4P59240 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC9.67□□□□□ -0.86
Nphp4P59240 Mir106b-201ENSMUST00000083580 82 ntBASIC9.67□□□□□ -0.86
Nphp4P59240 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 AC165260.6-206ENSMUST00000223884 3698 ntBASIC9.67□□□□□ -0.86
Nphp4P59240 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nphp4P59240 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Nphp4P59240 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Nphp4P59240 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Nphp4P59240 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC9.66□□□□□ -0.86
Nphp4P59240 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Gm12504-202ENSMUST00000148026 306 ntBASIC9.66□□□□□ -0.86
Nphp4P59240 Gm25660-201ENSMUST00000158470 104 ntBASIC9.66□□□□□ -0.86
Nphp4P59240 Gm18808-201ENSMUST00000173316 462 ntBASIC9.66□□□□□ -0.86
Nphp4P59240 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC9.66□□□□□ -0.86
Nphp4P59240 Gm43725-201ENSMUST00000200122 369 ntBASIC9.66□□□□□ -0.86
Nphp4P59240 Gm7452-201ENSMUST00000200764 788 ntBASIC9.66□□□□□ -0.86
Nphp4P59240 Gm9110-201ENSMUST00000219035 617 ntBASIC9.66□□□□□ -0.86
Nphp4P59240 AC160114.2-201ENSMUST00000223021 300 ntBASIC9.66□□□□□ -0.86
Nphp4P59240 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Nphp4P59240 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Nphp4P59240 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Gm37785-201ENSMUST00000195783 2408 ntBASIC9.66□□□□□ -0.86
Nphp4P59240 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Gm10513-201ENSMUST00000194203 6468 ntBASIC9.66□□□□□ -0.86
Nphp4P59240 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.66□□□□□ -0.86
Nphp4P59240 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC9.66□□□□□ -0.86
Nphp4P59240 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Nphp4P59240 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 AC111010.1-203ENSMUST00000227287 1548 ntBASIC9.66□□□□□ -0.86
Nphp4P59240 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Nphp4P59240 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
Nphp4P59240 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Nphp4P59240 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nphp4P59240 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms