Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Msh6P54276 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Msh6P54276 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Msh6P54276 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC9.16□□□□□ -0.94
Msh6P54276 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Msh6P54276 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Msh6P54276 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC9.16□□□□□ -0.94
Msh6P54276 Gm43679-201ENSMUST00000197051 3677 ntBASIC9.16□□□□□ -0.94
Msh6P54276 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Msh6P54276 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm12710-201ENSMUST00000119011 216 ntBASIC9.15□□□□□ -0.94
Msh6P54276 Gm14380-201ENSMUST00000122298 431 ntBASIC9.15□□□□□ -0.94
Msh6P54276 Gm12778-201ENSMUST00000122341 333 ntBASIC9.15□□□□□ -0.94
Msh6P54276 Mir7082-201ENSMUST00000183526 92 ntBASIC9.15□□□□□ -0.94
Msh6P54276 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC9.15□□□□□ -0.94
Msh6P54276 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC9.15□□□□□ -0.94
Msh6P54276 Gm9357-201ENSMUST00000207138 805 ntBASIC9.15□□□□□ -0.94
Msh6P54276 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC9.15□□□□□ -0.94
Msh6P54276 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC9.15□□□□□ -0.94
Msh6P54276 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm10126-201ENSMUST00000221732 168 ntBASIC9.15□□□□□ -0.94
Msh6P54276 AL591207.2-201ENSMUST00000222991 337 ntBASIC9.15□□□□□ -0.94
Msh6P54276 AC167013.4-201ENSMUST00000226712 317 ntBASIC9.15□□□□□ -0.94
Msh6P54276 AC121542.2-201ENSMUST00000227529 400 ntBASIC9.15□□□□□ -0.94
Msh6P54276 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm5528-201ENSMUST00000076314 480 ntBASIC9.15□□□□□ -0.94
Msh6P54276 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Msh6P54276 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Msh6P54276 CT571245.1-201ENSMUST00000218642 3465 ntBASIC9.15□□□□□ -0.94
Msh6P54276 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Msh6P54276 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Msh6P54276 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Msh6P54276 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Msh6P54276 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Msh6P54276 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Msh6P54276 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC9.15□□□□□ -0.95
Msh6P54276 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC9.15□□□□□ -0.95
Msh6P54276 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Msh6P54276 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.95
Msh6P54276 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC9.14□□□□□ -0.95
Msh6P54276 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Gm22256-201ENSMUST00000102291 107 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Msh6P54276 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Msh6P54276 Gm14772-201ENSMUST00000116562 514 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Gm16016-201ENSMUST00000120831 550 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Gm22024-201ENSMUST00000122733 287 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Gm17212-201ENSMUST00000166666 259 ntBASIC9.14□□□□□ -0.95
Msh6P54276 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC9.14□□□□□ -0.95
Msh6P54276 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Gm37189-201ENSMUST00000192131 298 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Gm4751-201ENSMUST00000200620 1105 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Gm7452-201ENSMUST00000200764 788 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Gm44566-201ENSMUST00000207638 304 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC9.14□□□□□ -0.95
Msh6P54276 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Msh6P54276 AC122426.2-201ENSMUST00000216522 2947 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC9.14□□□□□ -0.95
Msh6P54276 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC9.14□□□□□ -0.95
Msh6P54276 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC9.14□□□□□ -0.95
Msh6P54276 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC9.14□□□□□ -0.95
Msh6P54276 AC152394.1-201ENSMUST00000227360 1086 ntBASIC9.14□□□□□ -0.95
Msh6P54276 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Msh6P54276 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Msh6P54276 AC159635.1-201ENSMUST00000220905 2102 ntBASIC9.14□□□□□ -0.95
Msh6P54276 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms