Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm18808-201ENSMUST00000173316 462 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Gm27684-201ENSMUST00000183778 80 ntBASIC6.98□□□□□ -1.29
Sox3P53784 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Gm29143-201ENSMUST00000189462 201 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.98□□□□□ -1.29
Sox3P53784 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Olfr471-201ENSMUST00000210091 936 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Gm6581-201ENSMUST00000214545 260 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.98□□□□□ -1.29
Sox3P53784 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Sox3P53784 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.98□□□□□ -1.29
Sox3P53784 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.98□□□□□ -1.29
Sox3P53784 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Sox3P53784 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Sox3P53784 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Sox3P53784 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Sox3P53784 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Sox3P53784 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Sox3P53784 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.98□□□□□ -1.29
Sox3P53784 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Sox3P53784 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm37618-201ENSMUST00000192891 3075 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC6.97□□□□□ -1.29
Sox3P53784 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Sox3P53784 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm22671-201ENSMUST00000104420 134 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm13423-201ENSMUST00000117205 888 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Gm11371-201ENSMUST00000120294 385 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.97□□□□□ -1.29
Sox3P53784 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm22847-201ENSMUST00000157707 105 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC6.97□□□□□ -1.29
Sox3P53784 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm10410-201ENSMUST00000180138 384 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Gm26898-201ENSMUST00000181678 384 ntBASIC6.97□□□□□ -1.29
Sox3P53784 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Mir8105-201ENSMUST00000184718 89 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Gm18501-201ENSMUST00000185363 664 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC6.97□□□□□ -1.29
Sox3P53784 Gm29369-201ENSMUST00000190674 615 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Gm43147-201ENSMUST00000196944 542 ntBASIC6.97□□□□□ -1.29
Sox3P53784 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Sox3P53784 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Sox3P53784 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Sox3P53784 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.97□□□□□ -1.29
Sox3P53784 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Sox3P53784 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.97□□□□□ -1.29
Sox3P53784 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Sox3P53784 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Sox3P53784 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Sox3P53784 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Sox3P53784 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Sox3P53784 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Sox3P53784 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Sox3P53784 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.96□□□□□ -1.29
Sox3P53784 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.96□□□□□ -1.29
Sox3P53784 Gm38302-201ENSMUST00000191676 2076 ntBASIC6.96□□□□□ -1.29
Sox3P53784 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms