Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.02□□□□□ -1.13
Sox1P53783 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Sox1P53783 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Clca2-201ENSMUST00000040465 3986 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Gm42515-201ENSMUST00000199936 3583 ntBASIC8.02□□□□□ -1.13
Sox1P53783 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Sox1P53783 Olfr549-202ENSMUST00000217478 1891 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Sox1P53783 Eps15-202ENSMUST00000102729 5190 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC8.02□□□□□ -1.13
Sox1P53783 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 Gm43414-201ENSMUST00000197710 3188 ntBASIC8.02□□□□□ -1.13
Sox1P53783 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Sox1P53783 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Sox1P53783 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Sox1P53783 Vps8-201ENSMUST00000096191 4952 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 BC055308-201ENSMUST00000193380 2538 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm18359-201ENSMUST00000173024 1459 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC8.01□□□□□ -1.13
Sox1P53783 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gm4910-201ENSMUST00000119605 366 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gm8061-201ENSMUST00000122380 350 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm23663-201ENSMUST00000158045 80 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gm10591-201ENSMUST00000178168 402 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Ccl21b-202ENSMUST00000178864 402 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm17786-201ENSMUST00000182000 427 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gm26942-201ENSMUST00000182854 797 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gm27156-201ENSMUST00000184589 754 ntBASIC8.01□□□□□ -1.13
Sox1P53783 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Gm28164-201ENSMUST00000190143 442 ntBASIC8.01□□□□□ -1.13
Sox1P53783 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.01□□□□□ -1.13
Sox1P53783 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm44253-201ENSMUST00000203387 628 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC8.01□□□□□ -1.13
Sox1P53783 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm18039-201ENSMUST00000217816 728 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm19340-201ENSMUST00000221995 345 ntBASIC8.01□□□□□ -1.13
Sox1P53783 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.01□□□□□ -1.13
Sox1P53783 AC166830.1-201ENSMUST00000224201 533 ntBASIC8.01□□□□□ -1.13
Sox1P53783 AC140210.1-201ENSMUST00000224961 534 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Sox1P53783 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Sox1P53783 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Sox1P53783 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Sox1P53783 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Sox1P53783 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Cd84-204ENSMUST00000136479 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
Sox1P53783 Gm16223-201ENSMUST00000087332 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Gm28307-201ENSMUST00000190685 2694 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Tyms-201ENSMUST00000026846 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Btbd11-202ENSMUST00000105306 3945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Sox1P53783 AC160637.1-201ENSMUST00000214037 3887 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gm37731-201ENSMUST00000194545 2237 ntBASIC8.01□□□□□ -1.13
Sox1P53783 Gm37522-201ENSMUST00000195437 2884 ntBASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms