Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm17875-201ENSMUST00000216005 941 ntBASIC7.79□□□□□ -1.16
Usp4P35123 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC7.79□□□□□ -1.16
Usp4P35123 CT030170.6-202ENSMUST00000223186 544 ntBASIC7.79□□□□□ -1.16
Usp4P35123 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.79□□□□□ -1.16
Usp4P35123 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Gm5815-201ENSMUST00000050706 1185 ntBASIC7.79□□□□□ -1.16
Usp4P35123 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Usp4P35123 Snora9-201ENSMUST00000082579 133 ntBASIC7.79□□□□□ -1.16
Usp4P35123 Gm22865-201ENSMUST00000083949 214 ntBASIC7.79□□□□□ -1.16
Usp4P35123 Mir484-201ENSMUST00000093566 67 ntBASIC7.79□□□□□ -1.16
Usp4P35123 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Usp4P35123 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.79□□□□□ -1.16
Usp4P35123 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Usp4P35123 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.79□□□□□ -1.16
Usp4P35123 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.79□□□□□ -1.16
Usp4P35123 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.79□□□□□ -1.16
Usp4P35123 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.79□□□□□ -1.16
Usp4P35123 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp4P35123 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.78□□□□□ -1.16
Usp4P35123 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 AC126028.1-201ENSMUST00000226218 2123 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Usp4P35123 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.78□□□□□ -1.16
Usp4P35123 Gm24472-201ENSMUST00000104484 132 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Gm11969-201ENSMUST00000118848 356 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Gm15103-201ENSMUST00000119893 871 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC7.78□□□□□ -1.16
Usp4P35123 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC7.78□□□□□ -1.16
Usp4P35123 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Gm9451-201ENSMUST00000188491 604 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Gm37392-201ENSMUST00000192098 516 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC7.78□□□□□ -1.16
Usp4P35123 Gm18131-201ENSMUST00000199241 449 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.78□□□□□ -1.16
Usp4P35123 Gm33096-201ENSMUST00000210189 493 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Gm45782-201ENSMUST00000212670 366 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Gm18242-201ENSMUST00000218455 542 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC7.78□□□□□ -1.16
Usp4P35123 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.78□□□□□ -1.16
Usp4P35123 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.78□□□□□ -1.16
Usp4P35123 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
Usp4P35123 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Usp4P35123 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Usp4P35123 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Usp4P35123 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Usp4P35123 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Usp4P35123 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.78□□□□□ -1.16
Usp4P35123 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Usp4P35123 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Usp4P35123 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp4P35123 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Usp4P35123 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Usp4P35123 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC7.78□□□□□ -1.16
Usp4P35123 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Usp4P35123 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Usp4P35123 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Usp4P35123 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.16
Usp4P35123 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.77□□□□□ -1.16
Usp4P35123 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Usp4P35123 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Usp4P35123 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms