Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 C330007P06Rik-202ENSMUST00000115248 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hoxd8P23463 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC8.43□□□□□ -1.06
Hoxd8P23463 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Hoxd8P23463 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.43□□□□□ -1.06
Hoxd8P23463 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Hoxd8P23463 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hoxd8P23463 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.43□□□□□ -1.06
Hoxd8P23463 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hoxd8P23463 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Hoxd8P23463 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Hoxd8P23463 AC154681.1-201ENSMUST00000225876 1735 ntBASIC8.43□□□□□ -1.06
Hoxd8P23463 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
Hoxd8P23463 Gm43336-201ENSMUST00000200487 4504 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Cdk15-202ENSMUST00000160662 2108 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Klhl20-201ENSMUST00000111611 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 AC132392.1-202ENSMUST00000216652 2681 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm6429-201ENSMUST00000117144 475 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm11845-201ENSMUST00000117886 327 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm13649-201ENSMUST00000122325 606 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm13194-201ENSMUST00000142299 311 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Mir1981-201ENSMUST00000157934 82 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm20797-201ENSMUST00000177894 383 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm27435-201ENSMUST00000183588 88 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.42□□□□□ -1.06
Hoxd8P23463 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Hoxd8P23463 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm43841-201ENSMUST00000199491 586 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 AC122372.1-201ENSMUST00000215344 280 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC8.42□□□□□ -1.06
Hoxd8P23463 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC8.42□□□□□ -1.06
Hoxd8P23463 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC8.42□□□□□ -1.06
Hoxd8P23463 AC154806.1-202ENSMUST00000227949 885 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 AC152394.2-202ENSMUST00000228503 1064 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm26003-201ENSMUST00000083061 113 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 n-R5s196-201ENSMUST00000083136 117 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Olfr1143-201ENSMUST00000090708 945 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Mapk6-201ENSMUST00000049355 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm10302-201ENSMUST00000174433 3535 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Olfr1221-204ENSMUST00000217635 3753 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Gm37069-201ENSMUST00000192742 4142 ntBASIC8.42□□□□□ -1.06
Hoxd8P23463 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Hoxd8P23463 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Hoxd8P23463 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Hoxd8P23463 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxd8P23463 Ccdc171-201ENSMUST00000053414 4525 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Hoxd8P23463 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxd8P23463 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxd8P23463 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC8.41□□□□□ -1.06
Hoxd8P23463 Gm20775-201ENSMUST00000100115 1851 ntBASIC8.41□□□□□ -1.06
Hoxd8P23463 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Hoxd8P23463 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.41□□□□□ -1.06
Hoxd8P23463 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
Hoxd8P23463 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxd8P23463 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Hoxd8P23463 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxd8P23463 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxd8P23463 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxd8P23463 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxd8P23463 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxd8P23463 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Hoxd8P23463 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxd8P23463 Gm6767-201ENSMUST00000118650 1381 ntBASIC8.41□□□□□ -1.06
Hoxd8P23463 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms