Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm29385-201ENSMUST00000186831 363 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Gm28377-201ENSMUST00000189695 720 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Gm9504-201ENSMUST00000196322 468 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Gm9367-201ENSMUST00000205703 546 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm18040-201ENSMUST00000217922 827 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Cma2-202ENSMUST00000228263 857 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Mir138-1-201ENSMUST00000083480 99 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Col1a1P11087 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC8.42□□□□□ -1.06
Col1a1P11087 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Gm14896-201ENSMUST00000121311 1351 ntBASIC8.42□□□□□ -1.06
Col1a1P11087 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Col1a1P11087 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col1a1P11087 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.41□□□□□ -1.06
Col1a1P11087 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.41□□□□□ -1.06
Col1a1P11087 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 Mir674-201ENSMUST00000102421 100 ntBASIC8.41□□□□□ -1.06
Col1a1P11087 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Col1a1P11087 Gm4660-201ENSMUST00000131499 403 ntBASIC8.41□□□□□ -1.06
Col1a1P11087 Gm4152-201ENSMUST00000172675 259 ntBASIC8.41□□□□□ -1.06
Col1a1P11087 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC8.41□□□□□ -1.06
Col1a1P11087 Gm18799-201ENSMUST00000189104 913 ntBASIC8.41□□□□□ -1.06
Col1a1P11087 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.41□□□□□ -1.06
Col1a1P11087 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.41□□□□□ -1.06
Col1a1P11087 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 Gm24924-201ENSMUST00000084007 164 ntBASIC8.41□□□□□ -1.06
Col1a1P11087 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Col1a1P11087 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Col1a1P11087 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Col1a1P11087 AC153955.4-201ENSMUST00000217069 2752 ntBASIC8.41□□□□□ -1.06
Col1a1P11087 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.41□□□□□ -1.06
Col1a1P11087 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col1a1P11087 AC130219.1-201ENSMUST00000228406 3433 ntBASIC8.41□□□□□ -1.06
Col1a1P11087 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 AC155234.1-201ENSMUST00000225610 2823 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Col1a1P11087 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Col1a1P11087 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Col1a1P11087 Mir697-201ENSMUST00000102316 109 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Gm22426-201ENSMUST00000103811 96 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Gm14251-201ENSMUST00000122133 279 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm25435-201ENSMUST00000158277 267 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Gm4613-201ENSMUST00000165488 276 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Gm9027-201ENSMUST00000165914 661 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm37285-201ENSMUST00000194465 1139 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Gm37901-201ENSMUST00000195107 514 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm19324-201ENSMUST00000213229 1169 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.4□□□□□ -1.06
Col1a1P11087 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Col1a1P11087 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm2840-201ENSMUST00000048361 411 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Gm20302-201ENSMUST00000080671 275 ntBASIC8.4□□□□□ -1.06
Col1a1P11087 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Col1a1P11087 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Col1a1P11087 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC8.4□□□□□ -1.06
Col1a1P11087 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col1a1P11087 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms