Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm9419-201ENSMUST00000200672 567 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm30646-201ENSMUST00000207662 180 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm4574-201ENSMUST00000207804 542 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm2398-201ENSMUST00000218347 883 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm40853-201ENSMUST00000221342 582 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 AC162934.2-201ENSMUST00000221451 249 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm9255-201ENSMUST00000223225 581 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 AC154594.1-201ENSMUST00000225171 1273 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 AC167192.1-201ENSMUST00000225908 139 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 AC154806.5-205ENSMUST00000228828 411 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm5436-201ENSMUST00000058103 643 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm44280-201ENSMUST00000204498 3111 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm5715-201ENSMUST00000196854 1465 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm43686-201ENSMUST00000197351 2439 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm22231-201ENSMUST00000101027 73 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm14576-201ENSMUST00000118073 1111 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm11649-201ENSMUST00000118214 375 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm14795-201ENSMUST00000118461 471 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm13525-201ENSMUST00000120607 478 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm22408-201ENSMUST00000174925 65 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm38181-201ENSMUST00000181357 720 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm18875-201ENSMUST00000188563 882 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm36928-201ENSMUST00000192466 694 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm37883-201ENSMUST00000194970 725 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm37325-201ENSMUST00000194971 694 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm27680-202ENSMUST00000199221 807 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm5317-201ENSMUST00000204445 847 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm24613-201ENSMUST00000083266 130 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm25189-201ENSMUST00000083911 164 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm10826-201ENSMUST00000215366 3304 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Ptger2-201ENSMUST00000046891 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Gm37124-201ENSMUST00000192140 1992 ntBASIC8.35□□□□□ -1.07
Clp1Q99LI9 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clp1Q99LI9 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms