Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm7571-201ENSMUST00000120252 927 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm3611-201ENSMUST00000173687 877 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm22132-201ENSMUST00000175316 100 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm5787-201ENSMUST00000183049 1038 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm37225-201ENSMUST00000193423 325 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm2505-201ENSMUST00000200413 825 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm9419-201ENSMUST00000200672 567 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm21048-201ENSMUST00000202470 1166 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm44590-201ENSMUST00000206161 391 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.5□□□□□ -1.05
Nup88Q8CEC0 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Nup88Q8CEC0 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm15481-201ENSMUST00000120264 539 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm5135-201ENSMUST00000121100 573 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm23077-201ENSMUST00000157854 116 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm19840-201ENSMUST00000169624 882 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm21182-201ENSMUST00000178899 794 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm5445-201ENSMUST00000180224 480 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Mir8094-201ENSMUST00000183361 117 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Mir6987-201ENSMUST00000184789 73 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm7419-201ENSMUST00000209962 925 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 AL837512.1-201ENSMUST00000223914 1073 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm45793-201ENSMUST00000207900 1342 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Nup88Q8CEC0 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm13414-201ENSMUST00000117516 727 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm14202-201ENSMUST00000120121 311 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm11263-201ENSMUST00000121853 749 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm25281-201ENSMUST00000157270 104 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm22262-201ENSMUST00000158713 86 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm27373-201ENSMUST00000184017 184 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm44760-201ENSMUST00000206375 1173 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm45506-201ENSMUST00000211620 280 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 AC124510.2-201ENSMUST00000221958 683 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm22865-201ENSMUST00000083949 214 ntBASIC8.48□□□□□ -1.05
Nup88Q8CEC0 Gm6419-201ENSMUST00000097166 429 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms