Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Mir1929-201ENSMUST00000158635 93 ntBASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm24228-201ENSMUST00000158829 129 ntBASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm22642-201ENSMUST00000175352 252 ntBASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Mir7033-201ENSMUST00000184259 81 ntBASIC9.92□□□□□ -0.82
Usp40Q8BWR4 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 AC164883.2-201ENSMUST00000227931 3815 ntBASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm44950-201ENSMUST00000206403 2296 ntBASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm43331-201ENSMUST00000197991 1689 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm20749-201ENSMUST00000186319 3492 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm13878-201ENSMUST00000117986 577 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm8812-201ENSMUST00000118496 412 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm8312-201ENSMUST00000119380 618 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm25969-201ENSMUST00000157166 132 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm38022-201ENSMUST00000191762 403 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm2221-201ENSMUST00000209342 418 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm19238-201ENSMUST00000221936 1260 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 AC126554.3-201ENSMUST00000223131 493 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gpr87-201ENSMUST00000056898 1080 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm5528-201ENSMUST00000076314 480 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm45174-201ENSMUST00000208884 3065 ntBASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp40Q8BWR4 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm26645-201ENSMUST00000181076 1316 ntBASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm24286-201ENSMUST00000157632 128 ntBASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm25556-201ENSMUST00000158077 144 ntBASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp40Q8BWR4 Gm45072-201ENSMUST00000208673 929 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 208 ms