Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Rif1Q6PR54 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.26□□□□□ -1.41
Rif1Q6PR54 Gm23734-201ENSMUST00000083753 109 ntBASIC6.26□□□□□ -1.41
Rif1Q6PR54 Gm37813-201ENSMUST00000195003 3695 ntBASIC6.26□□□□□ -1.41
Rif1Q6PR54 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Rif1Q6PR54 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Rif1Q6PR54 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Rif1Q6PR54 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Rif1Q6PR54 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Rif1Q6PR54 Gm45746-201ENSMUST00000212623 2447 ntBASIC6.26□□□□□ -1.41
Rif1Q6PR54 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Rif1Q6PR54 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Rif1Q6PR54 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Rif1Q6PR54 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Rif1Q6PR54 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
Rif1Q6PR54 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Rif1Q6PR54 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Rif1Q6PR54 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gsk3b-202ENSMUST00000114750 1750 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Ano4-208ENSMUST00000182613 3880 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm44423-201ENSMUST00000203746 3158 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm25311-201ENSMUST00000104136 132 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm9439-201ENSMUST00000119554 973 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm23007-201ENSMUST00000158951 177 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm20778-201ENSMUST00000178524 627 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm42673-201ENSMUST00000202676 337 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm9367-201ENSMUST00000205703 546 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm43221-201ENSMUST00000197612 2071 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 Zbtb44-206ENSMUST00000217092 2472 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm44937-201ENSMUST00000207705 2691 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 Pitpnm2os1-201ENSMUST00000161697 1618 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Mrpl48-201ENSMUST00000064334 1865 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Cnot2-202ENSMUST00000105265 2268 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Olfr914-202ENSMUST00000217057 4948 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm23979-201ENSMUST00000104071 128 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm27820-201ENSMUST00000183628 175 ntBASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.25□□□□□ -1.41
Rif1Q6PR54 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Rif1Q6PR54 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Rif1Q6PR54 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.24□□□□□ -1.41
Rif1Q6PR54 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rif1Q6PR54 Gm2233-201ENSMUST00000222566 1916 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rif1Q6PR54 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rif1Q6PR54 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rif1Q6PR54 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rif1Q6PR54 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rif1Q6PR54 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rif1Q6PR54 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.24□□□□□ -1.41
Rif1Q6PR54 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rif1Q6PR54 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rif1Q6PR54 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rif1Q6PR54 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms