Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 AC158142.3-201ENSMUST00000226230 675 ntBASIC7.18□□□□□ -1.26
Usp39Q3TIX9 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Gm44228-201ENSMUST00000204888 2026 ntBASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Gm6767-201ENSMUST00000118650 1381 ntBASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp39Q3TIX9 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm12788-201ENSMUST00000119090 308 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm14739-201ENSMUST00000120424 802 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm8577-201ENSMUST00000122420 986 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm24011-201ENSMUST00000157732 268 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm22948-201ENSMUST00000158561 243 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm43040-201ENSMUST00000202399 558 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AC161250.1-201ENSMUST00000213426 1111 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AC160338.3-201ENSMUST00000214836 384 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AC153532.1-201ENSMUST00000218126 1111 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AL590616.1-201ENSMUST00000223339 574 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AC069562.1-201ENSMUST00000224206 434 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AC118249.1-201ENSMUST00000224822 608 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 AC124450.1-201ENSMUST00000225569 495 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp39Q3TIX9 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Grik1-209ENSMUST00000227986 2942 ntBASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Gm6823-201ENSMUST00000120791 1839 ntBASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Gm25725-201ENSMUST00000104528 130 ntBASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp39Q3TIX9 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 123.2 ms