Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Col6a3E9PWQ3 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm26505-201ENSMUST00000176208 166 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 CT025642.2-201ENSMUST00000225009 1649 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 CT009711.1-201ENSMUST00000223992 3040 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm15203-201ENSMUST00000117668 455 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm26323-201ENSMUST00000157743 175 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm18833-201ENSMUST00000173218 862 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm27225-201ENSMUST00000183833 557 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm43905-201ENSMUST00000204516 204 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm5457-201ENSMUST00000022260 333 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm8648-201ENSMUST00000122457 221 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm25224-201ENSMUST00000158195 68 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm43354-201ENSMUST00000196862 346 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 AC153937.1-201ENSMUST00000218734 412 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col6a3E9PWQ3 Gm38352-201ENSMUST00000194459 2557 ntBASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gm5073-201ENSMUST00000118222 820 ntBASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gm2058-201ENSMUST00000178791 560 ntBASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gm9499-201ENSMUST00000180888 964 ntBASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Ppp1r2-ps7-202ENSMUST00000185057 763 ntBASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gm9480-201ENSMUST00000198038 616 ntBASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gm28649-201ENSMUST00000189153 1581 ntBASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gm28581-201ENSMUST00000186086 2177 ntBASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col6a3E9PWQ3 Gm11298-201ENSMUST00000120503 1799 ntBASIC6.9□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms