Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm5135-201ENSMUST00000121100 573 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm16523-201ENSMUST00000121253 592 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm26179-201ENSMUST00000177723 132 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm18995-201ENSMUST00000202981 520 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm18765-201ENSMUST00000203166 660 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm45042-201ENSMUST00000207377 211 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Vps53Q8CCB4 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
Vps53Q8CCB4 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.52□□□□□ -1.04
Vps53Q8CCB4 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 n-R5s172-201ENSMUST00000104508 114 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm11622-201ENSMUST00000120525 691 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm7599-201ENSMUST00000121453 796 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm11895-201ENSMUST00000122165 467 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Mir3078-201ENSMUST00000175231 87 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm25692-201ENSMUST00000175444 125 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm27542-201ENSMUST00000184184 256 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Mir6409-201ENSMUST00000184957 92 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm42424-201ENSMUST00000198319 376 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm4870-201ENSMUST00000198525 1251 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm45198-201ENSMUST00000206796 591 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 AC115735.5-201ENSMUST00000228386 397 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps53Q8CCB4 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.51□□□□□ -1.05
Vps53Q8CCB4 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps53Q8CCB4 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms