Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm43724-201ENSMUST00000197516 226 ntBASIC7.35□□□□□ -1.23
HttP42859 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC7.35□□□□□ -1.23
HttP42859 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC7.35□□□□□ -1.23
HttP42859 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC7.35□□□□□ -1.23
HttP42859 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC7.35□□□□□ -1.23
HttP42859 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
HttP42859 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
HttP42859 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Gm14836-201ENSMUST00000118567 471 ntBASIC7.35□□□□□ -1.23
HttP42859 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.35□□□□□ -1.23
HttP42859 BC049739-201ENSMUST00000202626 660 ntBASIC7.35□□□□□ -1.23
HttP42859 AC153870.1-201ENSMUST00000219599 560 ntBASIC7.35□□□□□ -1.23
HttP42859 Gm23330-201ENSMUST00000082660 164 ntBASIC7.35□□□□□ -1.23
HttP42859 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
HttP42859 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Gm8648-201ENSMUST00000122457 221 ntBASIC7.34□□□□□ -1.23
HttP42859 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Gm18699-201ENSMUST00000190713 243 ntBASIC7.34□□□□□ -1.23
HttP42859 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Gm18805-201ENSMUST00000206872 655 ntBASIC7.34□□□□□ -1.23
HttP42859 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
HttP42859 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.34□□□□□ -1.23
HttP42859 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.34□□□□□ -1.23
HttP42859 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
HttP42859 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Gm13428-201ENSMUST00000117540 365 ntBASIC7.34□□□□□ -1.23
HttP42859 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.34□□□□□ -1.23
HttP42859 Gm7212-201ENSMUST00000120817 348 ntBASIC7.34□□□□□ -1.23
HttP42859 Gm15801-201ENSMUST00000120920 522 ntBASIC7.34□□□□□ -1.23
HttP42859 Gm8783-201ENSMUST00000159764 522 ntBASIC7.34□□□□□ -1.23
HttP42859 Mir3078-201ENSMUST00000175231 87 ntBASIC7.34□□□□□ -1.23
HttP42859 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HttP42859 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.34□□□□□ -1.23
HttP42859 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.34□□□□□ -1.23
HttP42859 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.34□□□□□ -1.23
HttP42859 Gm5582-201ENSMUST00000075251 522 ntBASIC7.34□□□□□ -1.23
HttP42859 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HttP42859 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
HttP42859 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 CT025645.1-201ENSMUST00000222760 4322 ntBASIC7.34□□□□□ -1.23
HttP42859 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HttP42859 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
HttP42859 Gm35808-201ENSMUST00000204769 2602 ntBASIC7.34□□□□□ -1.24
HttP42859 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
HttP42859 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
HttP42859 Gm38226-201ENSMUST00000192207 521 ntBASIC7.34□□□□□ -1.24
HttP42859 Gm45032-201ENSMUST00000205375 520 ntBASIC7.34□□□□□ -1.24
HttP42859 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC7.34□□□□□ -1.24
HttP42859 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
HttP42859 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
HttP42859 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.34□□□□□ -1.24
HttP42859 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
HttP42859 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
HttP42859 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
HttP42859 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Gm17841-201ENSMUST00000210711 2425 ntBASIC7.33□□□□□ -1.24
HttP42859 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 Ighv5-19-201ENSMUST00000193466 297 ntBASIC7.33□□□□□ -1.24
HttP42859 Gm19185-201ENSMUST00000196365 643 ntBASIC7.33□□□□□ -1.24
HttP42859 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
HttP42859 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
HttP42859 AC130219.1-201ENSMUST00000228406 3433 ntBASIC7.33□□□□□ -1.24
HttP42859 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
HttP42859 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
HttP42859 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms