Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Col18a1P39061 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Col18a1P39061 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Col18a1P39061 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Gm43839-201ENSMUST00000196183 2325 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Rnu11-201ENSMUST00000104135 134 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm15959-201ENSMUST00000121724 368 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Col18a1P39061 Gm17366-201ENSMUST00000167629 187 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm29234-201ENSMUST00000187452 1262 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm37920-201ENSMUST00000192952 749 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC9.47□□□□□ -0.89
Col18a1P39061 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC9.47□□□□□ -0.89
Col18a1P39061 Gm45899-201ENSMUST00000212196 1276 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 AC162934.2-201ENSMUST00000221451 249 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 CT009742.1-201ENSMUST00000222507 702 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 AC161374.1-201ENSMUST00000224191 794 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Col18a1P39061 Gm6776-201ENSMUST00000057752 900 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Col18a1P39061 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC9.47□□□□□ -0.89
Col18a1P39061 Gm24621-201ENSMUST00000082679 140 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Col18a1P39061 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Col18a1P39061 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col18a1P39061 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC9.46□□□□□ -0.89
Col18a1P39061 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col18a1P39061 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC9.46□□□□□ -0.89
Col18a1P39061 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Col18a1P39061 Gm9839-201ENSMUST00000195252 1437 ntBASIC9.46□□□□□ -0.89
Col18a1P39061 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Col18a1P39061 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col18a1P39061 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Col18a1P39061 Gm12242-201ENSMUST00000118824 738 ntBASIC9.46□□□□□ -0.9
Col18a1P39061 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC9.46□□□□□ -0.9
Col18a1P39061 Mir7008-201ENSMUST00000184398 63 ntBASIC9.46□□□□□ -0.9
Col18a1P39061 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col18a1P39061 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC9.46□□□□□ -0.9
Col18a1P39061 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Col18a1P39061 Olfr467-201ENSMUST00000084756 927 ntBASIC9.46□□□□□ -0.9
Col18a1P39061 AC158605.4-201ENSMUST00000219013 3361 ntBASIC9.46□□□□□ -0.9
Col18a1P39061 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC9.46□□□□□ -0.9
Col18a1P39061 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col18a1P39061 Gm11242-201ENSMUST00000120103 2457 ntBASIC9.46□□□□□ -0.9
Col18a1P39061 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Col18a1P39061 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col18a1P39061 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col18a1P39061 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col18a1P39061 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Col18a1P39061 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Col18a1P39061 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm23739-201ENSMUST00000102295 108 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm12710-201ENSMUST00000119011 216 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm18199-201ENSMUST00000173820 835 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm18191-201ENSMUST00000174624 824 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm37533-201ENSMUST00000193848 545 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm7343-201ENSMUST00000194510 1061 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm42580-201ENSMUST00000197223 753 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm18469-201ENSMUST00000208850 439 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 AC127242.4-201ENSMUST00000221242 470 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 AC160637.1-201ENSMUST00000214037 3887 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm18305-201ENSMUST00000216532 2128 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.45□□□□□ -0.9
Col18a1P39061 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Col18a1P39061 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm8872-201ENSMUST00000197475 1341 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Col18a1P39061 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC9.45□□□□□ -0.9
Col18a1P39061 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm38244-201ENSMUST00000191737 2586 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm6446-201ENSMUST00000120604 818 ntBASIC9.45□□□□□ -0.9
Col18a1P39061 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC9.45□□□□□ -0.9
Col18a1P39061 Gm26211-201ENSMUST00000158578 129 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms