Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm13545-201ENSMUST00000119044 482 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm15186-201ENSMUST00000119345 563 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm15481-201ENSMUST00000120264 539 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm25178-201ENSMUST00000122633 325 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm23220-201ENSMUST00000158115 137 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm23164-201ENSMUST00000175084 111 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm27218-201ENSMUST00000183745 392 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm20587-201ENSMUST00000186367 1186 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm7631-201ENSMUST00000196935 1100 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm42977-201ENSMUST00000197497 144 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm19228-201ENSMUST00000214030 717 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm18243-201ENSMUST00000220756 887 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.82□□□□□ -1.32
Use1Q9CQ56 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Use1Q9CQ56 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm26014-201ENSMUST00000104405 132 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm15079-201ENSMUST00000121943 216 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm22275-201ENSMUST00000122470 310 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm25845-201ENSMUST00000122588 310 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm22024-201ENSMUST00000122733 287 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm4835-201ENSMUST00000155839 972 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm22562-201ENSMUST00000157334 111 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm4252-201ENSMUST00000174823 313 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm21182-201ENSMUST00000178899 794 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm37689-201ENSMUST00000193139 275 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm7542-201ENSMUST00000201140 777 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm44566-201ENSMUST00000207638 304 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm45497-201ENSMUST00000211701 740 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 AC163041.1-201ENSMUST00000221984 133 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.81□□□□□ -1.32
Use1Q9CQ56 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Use1Q9CQ56 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Use1Q9CQ56 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms