Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm37314-201ENSMUST00000193545 2685 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm17821-201ENSMUST00000223448 1693 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 1700034I23Rik-201ENSMUST00000099123 2348 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 G730013B05Rik-201ENSMUST00000180509 2176 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm14248-201ENSMUST00000117790 544 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm15778-201ENSMUST00000118469 608 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm13521-201ENSMUST00000118922 866 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm13466-201ENSMUST00000121515 999 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm25180-201ENSMUST00000157746 115 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm24363-201ENSMUST00000158440 311 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm21182-201ENSMUST00000178899 794 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Mir6987-201ENSMUST00000184789 73 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm43558-201ENSMUST00000200155 210 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Ociad1-204ENSMUST00000200935 1139 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm44112-201ENSMUST00000204787 372 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm44722-201ENSMUST00000206473 436 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm45042-201ENSMUST00000207377 211 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm38236-201ENSMUST00000192661 3229 ntBASIC8.38□□□□□ -1.07
Clp1Q99LI9 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Runx1-207ENSMUST00000189679 2538 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Clp1Q99LI9 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Rhpn2-202ENSMUST00000085556 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm23701-201ENSMUST00000103893 110 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm26016-201ENSMUST00000104403 129 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms