Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm18040-201ENSMUST00000217922 827 ntBASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Mir425-201ENSMUST00000083645 85 ntBASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col16a1Q8BLX7 Gm15618-201ENSMUST00000121610 452 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm14380-201ENSMUST00000122298 431 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 n-R5s109-201ENSMUST00000179195 119 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm4556-201ENSMUST00000217808 355 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 AC164436.1-201ENSMUST00000227074 772 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm45407-201ENSMUST00000209499 3676 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm18248-201ENSMUST00000191164 1846 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm9575-201ENSMUST00000122140 1339 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm42820-201ENSMUST00000200084 3063 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm13313-201ENSMUST00000118938 1084 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm23810-201ENSMUST00000175150 74 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Gm8058-201ENSMUST00000217247 587 ntBASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Col16a1Q8BLX7 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 AC155234.1-201ENSMUST00000225610 2823 ntBASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm25117-201ENSMUST00000157194 144 ntBASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm18006-201ENSMUST00000177411 662 ntBASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm27998-201ENSMUST00000184902 361 ntBASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm28958-201ENSMUST00000185864 703 ntBASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm7166-201ENSMUST00000199715 303 ntBASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm2602-201ENSMUST00000202112 571 ntBASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm44091-201ENSMUST00000205212 649 ntBASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Snora21-201ENSMUST00000082967 137 ntBASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Col16a1Q8BLX7 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col16a1Q8BLX7 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col16a1Q8BLX7 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col16a1Q8BLX7 Gm37499-201ENSMUST00000194683 3478 ntBASIC9.4□□□□□ -0.91
Col16a1Q8BLX7 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col16a1Q8BLX7 Gm43323-201ENSMUST00000202328 4258 ntBASIC9.4□□□□□ -0.91
Col16a1Q8BLX7 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col16a1Q8BLX7 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Col16a1Q8BLX7 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Col16a1Q8BLX7 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 197.9 ms