Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm6931-201ENSMUST00000183103 371 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm29273-201ENSMUST00000188880 262 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm29562-201ENSMUST00000190113 904 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm19254-201ENSMUST00000204828 294 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm20074-201ENSMUST00000208144 484 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 AC123061.2-201ENSMUST00000226234 802 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 AC122356.2-201ENSMUST00000226962 820 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Hmgb1P63158 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Hmgb1P63158 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.35□□□□□ -1.07
Hmgb1P63158 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm43577-201ENSMUST00000197090 3344 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Mir705-201ENSMUST00000102058 82 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm24195-201ENSMUST00000116804 137 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm15154-201ENSMUST00000117590 366 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm13229-201ENSMUST00000118238 340 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm13160-201ENSMUST00000118441 627 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm12034-201ENSMUST00000119032 399 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm26351-201ENSMUST00000157532 232 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm37720-201ENSMUST00000195497 1241 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.34□□□□□ -1.07
Hmgb1P63158 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC8.34□□□□□ -1.07
Hmgb1P63158 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Grik1-209ENSMUST00000227986 2942 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Hmgb1P63158 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Hmgb1P63158 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.34□□□□□ -1.07
Hmgb1P63158 Gm37531-201ENSMUST00000191628 5415 ntBASIC8.34□□□□□ -1.07
Hmgb1P63158 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Hmgb1P63158 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Hmgb1P63158 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Hmgb1P63158 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Hmgb1P63158 Klf10-202ENSMUST00000226363 2917 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms