Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm25782-201ENSMUST00000122526 289 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC7.41□□□□□ -1.22
Atxn1P54254 Gm25164-201ENSMUST00000158908 116 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Gm18808-201ENSMUST00000173316 462 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Gm28929-201ENSMUST00000185330 1193 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Gm21877-201ENSMUST00000185640 694 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Gm18558-201ENSMUST00000186253 1214 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Gm7436-201ENSMUST00000187229 391 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Gm8004-201ENSMUST00000187782 617 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Gm37189-201ENSMUST00000192131 298 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Gm9240-201ENSMUST00000206527 742 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 AC134917.2-201ENSMUST00000223354 124 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Atxn1P54254 Gm37460-201ENSMUST00000191796 2249 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Atxn1P54254 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Atxn1P54254 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.41□□□□□ -1.22
Atxn1P54254 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
Atxn1P54254 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC7.41□□□□□ -1.22
Atxn1P54254 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Atxn1P54254 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Atxn1P54254 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
Atxn1P54254 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Atxn1P54254 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Atxn1P54254 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
Atxn1P54254 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.4□□□□□ -1.22
Atxn1P54254 Gm37326-201ENSMUST00000192828 3071 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm37499-201ENSMUST00000194683 3478 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Atxn1P54254 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm15715-201ENSMUST00000118032 283 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Atxn1P54254 Gm15192-201ENSMUST00000121005 293 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm13221-201ENSMUST00000121712 430 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.4□□□□□ -1.22
Atxn1P54254 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC7.4□□□□□ -1.22
Atxn1P54254 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Atxn1P54254 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Atxn1P54254 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Atxn1P54254 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Atxn1P54254 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC7.4□□□□□ -1.22
Atxn1P54254 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC7.4□□□□□ -1.22
Atxn1P54254 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
Atxn1P54254 Gm37225-201ENSMUST00000193423 325 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm38217-201ENSMUST00000194358 910 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.4□□□□□ -1.22
Atxn1P54254 Gm43689-201ENSMUST00000195951 427 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm44356-201ENSMUST00000196731 111 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC7.4□□□□□ -1.22
Atxn1P54254 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Atxn1P54254 Gm44902-201ENSMUST00000206177 805 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm44971-201ENSMUST00000206192 337 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC7.4□□□□□ -1.22
Atxn1P54254 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Atxn1P54254 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Atxn1P54254 Gm17995-201ENSMUST00000209266 530 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Gm45359-201ENSMUST00000210635 427 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 AC211878.5-201ENSMUST00000221697 409 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC7.4□□□□□ -1.22
Atxn1P54254 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.4□□□□□ -1.22
Atxn1P54254 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Atxn1P54254 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Atxn1P54254 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Atxn1P54254 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Atxn1P54254 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Atxn1P54254 Gm44249-201ENSMUST00000204538 1805 ntBASIC7.4□□□□□ -1.23
Atxn1P54254 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Atxn1P54254 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Atxn1P54254 Gm37706-201ENSMUST00000195379 2765 ntBASIC7.4□□□□□ -1.23
Atxn1P54254 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Atxn1P54254 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC7.4□□□□□ -1.23
Atxn1P54254 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
Atxn1P54254 Gm42972-201ENSMUST00000196937 5617 ntBASIC7.4□□□□□ -1.23
Atxn1P54254 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Atxn1P54254 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Atxn1P54254 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Atxn1P54254 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Atxn1P54254 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Atxn1P54254 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Atxn1P54254 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC7.39□□□□□ -1.23
Atxn1P54254 Gm37022-201ENSMUST00000192517 2254 ntBASIC7.39□□□□□ -1.23
Atxn1P54254 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Atxn1P54254 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Atxn1P54254 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Atxn1P54254 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms